Difference between revisions of "SJ15928"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18490 CPD-18490] == * common-name: ** (2e,9z,12z,15z,18z)-tetracosa-2,9,12,15,18-pentaenoyl...")
(Created page with "Category:gene == Gene SJ15928 == * transcription-direction: ** positive * right-end-position: ** 193215 * left-end-position: ** 185875 * centisome-position: ** 64.229706...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18490 CPD-18490] ==
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== Gene SJ15928 ==
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* common-name:
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* transcription-direction:
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** (2e,9z,12z,15z,18z)-tetracosa-2,9,12,15,18-pentaenoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cccccc=ccc=ccc=ccc=ccccccc=cc(sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-])=o
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** 193215
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* inchi-key:
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* left-end-position:
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** avrcofdawhwkmb-mnthwfihsa-j
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** 185875
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* molecular-weight:
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* centisome-position:
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** 1104.05
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** 64.229706   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-17110]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[PRPPAMIDOTRANS-RXN]]
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{{#set: common-name=(2e,9z,12z,15z,18z)-tetracosa-2,9,12,15,18-pentaenoyl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=avrcofdawhwkmb-mnthwfihsa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1104.05}}
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== Pathway(s) associated ==
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* [[PWY-7282]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6277]]
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** '''6''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6121]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6122]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=193215}}
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{{#set: left-end-position=185875}}
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{{#set: centisome-position=64.229706    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:01, 18 March 2021

Gene SJ15928

  • transcription-direction:
    • positive
  • right-end-position:
    • 193215
  • left-end-position:
    • 185875
  • centisome-position:
    • 64.229706

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7282
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-6277
    • 6 reactions found over 5 reactions in the full pathway
  • PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122
    • 4 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ15928&oldid=131922"