Difference between revisions of "SJ20707"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_III COPROPORPHYRINOGEN_III] == * common-name: ** coproporphyrinogen iii * sm...")
(Created page with "Category:gene == Gene SJ20707 == * transcription-direction: ** negative * right-end-position: ** 158422 * left-end-position: ** 138406 * centisome-position: ** 67.70040...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COPROPORPHYRINOGEN_III COPROPORPHYRINOGEN_III] ==
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== Gene SJ20707 ==
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* common-name:
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* transcription-direction:
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** coproporphyrinogen iii
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** negative
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* smiles:
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* right-end-position:
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** cc1(=c2(cc5(=c(c)c(ccc([o-])=o)=c(cc4(=c(ccc([o-])=o)c(c)=c(cc3(=c(ccc(=o)[o-])c(c)=c(cc(=c(ccc([o-])=o)1)n2)n3))n4))n5)))
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** 158422
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* inchi-key:
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* left-end-position:
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** niuvhxtxuxofeb-uhfffaoysa-j
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** 138406
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* molecular-weight:
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* centisome-position:
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** 656.734
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** 67.70040   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[HEMN-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-17517]]
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== Reaction(s) associated ==
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* [[RXN0-1461]]
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* [[ATPASE-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
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* [[UROGENDECARBOX-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: common-name=coproporphyrinogen iii}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=niuvhxtxuxofeb-uhfffaoysa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=656.734}}
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* [[RXN-11109]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=158422}}
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{{#set: left-end-position=138406}}
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{{#set: centisome-position=67.70040    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:03, 18 March 2021

Gene SJ20707

  • transcription-direction:
    • negative
  • right-end-position:
    • 158422
  • left-end-position:
    • 138406
  • centisome-position:
    • 67.70040

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ20707&oldid=132981"