Difference between revisions of "SJ08120"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-ISOVALERYL-COA 3-HYDROXY-ISOVALERYL-COA] == * common-name: ** 3-hydroxyisovaleryl-coa...")
(Created page with "Category:gene == Gene SJ08120 == * transcription-direction: ** positive * right-end-position: ** 337088 * left-end-position: ** 336672 * centisome-position: ** 75.63181...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-ISOVALERYL-COA 3-HYDROXY-ISOVALERYL-COA] ==
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== Gene SJ08120 ==
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* common-name:
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* transcription-direction:
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** 3-hydroxyisovaleryl-coa
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** positive
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* smiles:
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* right-end-position:
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** cc(cop(=o)([o-])op(=o)([o-])occ3(c(c(c(n2(c=nc1(c(=nc=nc=12)n)))o3)o)op([o-])([o-])=o))(c)c(c(nccc(nccsc(=o)cc(c)(c)o)=o)=o)o
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** 337088
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* inchi-key:
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* left-end-position:
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** pevzkilcbdeobt-uhfffaoysa-j
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** 336672
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* molecular-weight:
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* centisome-position:
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** 863.619
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** 75.63181   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ECH_LPAREN_3hivcoa_RPAREN_]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14266]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[ECH_LPAREN_3hivcoa_RPAREN_]]
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** Category: [[annotation]]
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* [[RXN-14266]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: common-name=3-hydroxyisovaleryl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=pevzkilcbdeobt-uhfffaoysa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=863.619}}
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=337088}}
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{{#set: left-end-position=336672}}
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{{#set: centisome-position=75.63181    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ08120

  • transcription-direction:
    • positive
  • right-end-position:
    • 337088
  • left-end-position:
    • 336672
  • centisome-position:
    • 75.63181

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08120&oldid=133274"