Difference between revisions of "SJ18892"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9867 CPD-9867] == * common-name: ** 3-(all-trans-decaprenyl)benzene-1,2-diol * smiles: ** c...")
(Created page with "Category:gene == Gene SJ18892 == * transcription-direction: ** positive * right-end-position: ** 14644 * left-end-position: ** 6553 * centisome-position: ** 2.7993984...")
 
(8 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9867 CPD-9867] ==
+
== Gene SJ18892 ==
−
* common-name:
+
* transcription-direction:
−
** 3-(all-trans-decaprenyl)benzene-1,2-diol
+
** positive
−
* smiles:
+
* right-end-position:
−
** cc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(o)=c(o)c=cc=1))c)c)c)c)c)c)c)c)c)c
+
** 14644
−
* inchi-key:
+
* left-end-position:
−
** caujtfnfoamxrt-xrbhbmlssa-n
+
** 6553
−
* molecular-weight:
+
* centisome-position:
−
** 791.294
+
** 2.7993984   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-9233]]
+
* [[S.japonica_carotenoid_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=3-(all-trans-decaprenyl)benzene-1,2-diol}}
+
* [[DIENOYLCOAREDUCT-RXN]]
−
{{#set: inchi-key=inchikey=caujtfnfoamxrt-xrbhbmlssa-n}}
+
** Category: [[annotation]]
−
{{#set: molecular-weight=791.294}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12521]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14715]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14776]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14790]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7835]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7911]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6837]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7307]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7337]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7338]]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5138]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=14644}}
 +
{{#set: left-end-position=6553}}
 +
{{#set: centisome-position=2.7993984    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=5}}

Latest revision as of 11:04, 18 March 2021

Gene SJ18892

  • transcription-direction:
    • positive
  • right-end-position:
    • 14644
  • left-end-position:
    • 6553
  • centisome-position:
    • 2.7993984

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6837
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7307
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7337
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7338
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-5138
    • 4 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18892&oldid=133379"