Difference between revisions of "SJ10621"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-L-PROLINE 4-HYDROXY-L-PROLINE] == * common-name: ** trans-4-hydroxy-l-proline * smile...")
(Created page with "Category:gene == Gene SJ10621 == * transcription-direction: ** negative * right-end-position: ** 322269 * left-end-position: ** 305442 * centisome-position: ** 78.901726...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-L-PROLINE 4-HYDROXY-L-PROLINE] ==
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== Gene SJ10621 ==
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* common-name:
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* transcription-direction:
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** trans-4-hydroxy-l-proline
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** negative
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* smiles:
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* right-end-position:
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** c1([n+]c(c(=o)[o-])cc(o)1)
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** 322269
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* inchi-key:
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* left-end-position:
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** pmmyeevymwasqn-dmtcnviqsa-n
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** 305442
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* molecular-weight:
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* centisome-position:
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** 131.131
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** 78.901726   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN490-3641]]
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== Reaction(s) associated ==
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* [[RXN66-546]]
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=trans-4-hydroxy-l-proline}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=pmmyeevymwasqn-dmtcnviqsa-n}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=131.131}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GLUTDEHYD-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[GLUTAMATE-DEG1-PWY]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[ALACAT2-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5022]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7126]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6728]]
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** '''11''' reactions found over '''19''' reactions in the full pathway
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* [[P162-PWY]]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[GLUTSYNIII-PWY]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5675]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY490-3]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5913]]
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** '''10''' reactions found over '''8''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=322269}}
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{{#set: left-end-position=305442}}
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{{#set: centisome-position=78.901726    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=10}}

Latest revision as of 11:04, 18 March 2021

Gene SJ10621

  • transcription-direction:
    • negative
  • right-end-position:
    • 322269
  • left-end-position:
    • 305442
  • centisome-position:
    • 78.901726

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLUTAMATE-DEG1-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • ALACAT2-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5022
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7126
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • P162-PWY
    • 7 reactions found over 10 reactions in the full pathway
  • GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5675
    • 4 reactions found over 4 reactions in the full pathway
  • PWY490-3
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10621&oldid=133420"