Difference between revisions of "SJ19084"

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(Created page with "Category:gene == Gene SJ21017 == * transcription-direction: ** negative * right-end-position: ** 194577 * left-end-position: ** 189532 * centisome-position: ** 94.19284...")
(Created page with "Category:gene == Gene SJ19084 == * transcription-direction: ** positive * right-end-position: ** 13980 * left-end-position: ** 2556 * centisome-position: ** 0.22404996...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21017 ==
+
== Gene SJ19084 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 194577
+
** 13980
 
* left-end-position:
 
* left-end-position:
−
** 189532
+
** 2556
 
* centisome-position:
 
* centisome-position:
−
** 94.19284    
+
** 0.22404996    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NADH-DEHYDROG-A-RXN]]
+
* [[RXN-15117]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
+
* [[RXN-5467]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NADH-DEHYDROGENASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-5469]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5330]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7817]]
−
* [[PWY0-1335]]
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
−
* [[PWY-4302]]
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-3781]]
+
{{#set: right-end-position=13980}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=2556}}
−
* [[PWY0-1334]]
+
{{#set: centisome-position=0.22404996   }}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6692]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5083]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7279]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1573]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7269]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1568]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1567]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=194577}}
 
−
{{#set: left-end-position=189532}}
 
−
{{#set: centisome-position=94.19284   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:04, 18 March 2021

Gene SJ19084

  • transcription-direction:
    • positive
  • right-end-position:
    • 13980
  • left-end-position:
    • 2556
  • centisome-position:
    • 0.22404996

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19084&oldid=133664"