Difference between revisions of "SJ01916"

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(Created page with "Category:gene == Gene SJ09367 == * transcription-direction: ** positive * right-end-position: ** 440879 * left-end-position: ** 428049 * centisome-position: ** 52.15931...")
(Created page with "Category:gene == Gene SJ01916 == * transcription-direction: ** positive * right-end-position: ** 499618 * left-end-position: ** 493268 * centisome-position: ** 90.073715...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09367 ==
+
== Gene SJ01916 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 440879
+
** 499618
 
* left-end-position:
 
* left-end-position:
−
** 428049
+
** 493268
 
* centisome-position:
 
* centisome-position:
−
** 52.15931    
+
** 90.073715    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-10642]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.3.1.75-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UROGENDECARBOX-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINOL-O-FATTY-ACYLTRANSFERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12547]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12639]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15090]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9356]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4193]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7766]]
+
* [[PWY-5885]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[CHLOROPHYLL-SYN]]
+
* [[PWY-5884]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[HEME-BIOSYNTHESIS-II]]
+
* [[TRIGLSYN-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6873]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7420]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7159]]
+
* [[PWY-282]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY0-1415]]
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5531]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEMESYN2-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=440879}}
+
{{#set: right-end-position=499618}}
−
{{#set: left-end-position=428049}}
+
{{#set: left-end-position=493268}}
−
{{#set: centisome-position=52.15931   }}
+
{{#set: centisome-position=90.073715   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:05, 18 March 2021

Gene SJ01916

  • transcription-direction:
    • positive
  • right-end-position:
    • 499618
  • left-end-position:
    • 493268
  • centisome-position:
    • 90.073715

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5885
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5884
    • 1 reactions found over 2 reactions in the full pathway
  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6873
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-282
    • 1 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01916&oldid=134150"