Difference between revisions of "SJ14143"
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(Created page with "Category:gene == Gene SJ16348 == * transcription-direction: ** negative * right-end-position: ** 244477 * left-end-position: ** 233534 * centisome-position: ** 81.97627...") |
(Created page with "Category:gene == Gene SJ14143 == * transcription-direction: ** negative * right-end-position: ** 54398 * left-end-position: ** 45543 * centisome-position: ** 14.059736...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14143 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 54398 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 45543 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 14.059736 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN0-2161]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[SERINE--TRNA-LIGASE-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| Line 28: | Line 23: | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY-6281]] |
| − | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | * [[ | + | * [[PWY0-901]] |
** '''2''' reactions found over '''3''' reactions in the full pathway | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[TRNA-CHARGING-PWY]] | ||
| + | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=54398}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=45543}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=14.059736 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:08, 18 March 2021
Contents
Gene SJ14143
- transcription-direction:
- negative
- right-end-position:
- 54398
- left-end-position:
- 45543
- centisome-position:
- 14.059736
Organism(s) associated with this gene
Reaction(s) associated
- RXN0-2161
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SERINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6281
- 4 reactions found over 4 reactions in the full pathway
- PWY0-901
- 2 reactions found over 3 reactions in the full pathway
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
