Difference between revisions of "SJ08112"

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(Created page with "Category:gene == Gene SJ11017 == * transcription-direction: ** positive * right-end-position: ** 1367450 * left-end-position: ** 1358538 * centisome-position: ** 94.050385...")
(Created page with "Category:gene == Gene SJ08112 == * transcription-direction: ** negative * right-end-position: ** 257028 * left-end-position: ** 245791 * centisome-position: ** 55.215816...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11017 ==
+
== Gene SJ08112 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 1367450
+
** 257028
 
* left-end-position:
 
* left-end-position:
−
** 1358538
+
** 245791
 
* centisome-position:
 
* centisome-position:
−
** 94.050385    
+
** 55.215816    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN]]
−
* [[1.2.1.25-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[1.2.4.4-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[2.3.1.168-RXN]]
+
{{#set: transcription-direction=negative}}
−
** Category: [[orthology]]
+
{{#set: right-end-position=257028}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=245791}}
−
* [[2KETO-3METHYLVALERATE-RXN]]
+
{{#set: centisome-position=55.215816   }}
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[KETOISOCAPROATE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[METHYLVALERATE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7719]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7790]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[VALDEG-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5046]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5108]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5130]]
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY66-428]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=1367450}}
 
−
{{#set: left-end-position=1358538}}
 
−
{{#set: centisome-position=94.050385   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:08, 18 March 2021

Gene SJ08112

  • transcription-direction:
    • negative
  • right-end-position:
    • 257028
  • left-end-position:
    • 245791
  • centisome-position:
    • 55.215816

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08112&oldid=135202"