Difference between revisions of "SJ03218"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI 2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI] == * common-name...")
 
(Created page with "Category:gene == Gene SJ03218 == * transcription-direction: ** positive * right-end-position: ** 111043 * left-end-position: ** 82690 * centisome-position: ** 67.08801...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI 2-AMINO-3-3-OXOPROP-2-ENYL-BUT-2-ENEDI] ==
+
== Gene SJ03218 ==
−
* common-name:
+
* transcription-direction:
−
** aminocarboxymuconate semialdehyde
+
** positive
−
* smiles:
+
* right-end-position:
−
** c(=o)([o-])c(=c(c([o-])=o)n)c=c[ch]=o
+
** 111043
−
* inchi-key:
+
* left-end-position:
−
** kacpvqqhdvbvfc-pmrvsphwsa-l
+
** 82690
−
* molecular-weight:
+
* centisome-position:
−
** 183.12
+
** 67.08801   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN]]
+
* [[S.japonica_carotenoid_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=aminocarboxymuconate semialdehyde}}
+
* [[PEROXID-RXN]]
−
{{#set: inchi-key=inchikey=kacpvqqhdvbvfc-pmrvsphwsa-l}}
+
** Category: [[annotation]]
−
{{#set: molecular-weight=183.12}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-7214]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7445]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5466]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6824]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=111043}}
 +
{{#set: left-end-position=82690}}
 +
{{#set: centisome-position=67.08801    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=6}}

Latest revision as of 11:01, 18 March 2021

Gene SJ03218

  • transcription-direction:
    • positive
  • right-end-position:
    • 111043
  • left-end-position:
    • 82690
  • centisome-position:
    • 67.08801

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03218&oldid=132138"