Difference between revisions of "CPD-6972"

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(Created page with "Category:gene == Gene SJ13260 == * transcription-direction: ** positive * right-end-position: ** 277021 * left-end-position: ** 274229 * centisome-position: ** 79.82029...")
(Created page with "Category:metabolite == Metabolite CPD-6972 == * common-name: ** 4-(2'-carboxyphenyl)-4-oxobutyryl-coa * smiles: ** cc(cop([o-])(=o)op([o-])(=o)occ3(c(c(c(n2(c=nc1(c(=nc=nc...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ13260 ==
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== Metabolite CPD-6972 ==
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* transcription-direction:
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* common-name:
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** positive
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** 4-(2'-carboxyphenyl)-4-oxobutyryl-coa
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* right-end-position:
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* smiles:
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** 277021
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** cc(cop([o-])(=o)op([o-])(=o)occ3(c(c(c(n2(c=nc1(c(=nc=nc=12)n)))o3)o)op([o-])(=o)[o-]))(c)c(c(nccc(nccsc(ccc(c4(c=cc=cc(c([o-])=o)=4))=o)=o)=o)=o)o
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* left-end-position:
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* inchi-key:
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** 274229
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** kvaqapqxoxtrae-uhfffaoysa-i
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* centisome-position:
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* molecular-weight:
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** 79.82029   
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** 966.676
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[NAPHTHOATE-SYN-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[NPHS]]
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* [[5.99.1.2-RXN]]
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* [[O-SUCCINYLBENZOATE-COA-LIG-RXN]]
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** Category: [[annotation]]
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* [[RXN-7614]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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* [[5.99.1.3-RXN]]
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{{#set: common-name=4-(2'-carboxyphenyl)-4-oxobutyryl-coa}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=kvaqapqxoxtrae-uhfffaoysa-i}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=966.676}}
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* [[ATPASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12195]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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</div>
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=277021}}
 
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{{#set: left-end-position=274229}}
 
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{{#set: centisome-position=79.82029    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=7}}
 
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{{#set: nb pathway associated=4}}
 

Latest revision as of 11:12, 18 March 2021

Metabolite CPD-6972

  • common-name:
    • 4-(2'-carboxyphenyl)-4-oxobutyryl-coa
  • smiles:
    • cc(cop([o-])(=o)op([o-])(=o)occ3(c(c(c(n2(c=nc1(c(=nc=nc=12)n)))o3)o)op([o-])(=o)[o-]))(c)c(c(nccc(nccsc(ccc(c4(c=cc=cc(c([o-])=o)=4))=o)=o)=o)=o)o
  • inchi-key:
    • kvaqapqxoxtrae-uhfffaoysa-i
  • molecular-weight:
    • 966.676

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-6972&oldid=137170"