Difference between revisions of "CPD-5846"

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(Created page with "Category:gene == Gene SJ06882 == * transcription-direction: ** positive * right-end-position: ** 362793 * left-end-position: ** 349863 * centisome-position: ** 74.659256...")
(Created page with "Category:metabolite == Metabolite CPD-5846 == * common-name: ** 3β-hydroxy-4β-methyl-5α-cholest-7-ene-4α-carboxylate * smiles: ** cc(c)cccc(c)[ch]4(c...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ06882 ==
+
== Metabolite CPD-5846 ==
* transcription-direction:
+
* common-name:
** positive
+
** 3β-hydroxy-4β-methyl-5α-cholest-7-ene-4α-carboxylate
* right-end-position:
+
* smiles:
** 362793
+
** cc(c)cccc(c)[ch]4(cc[ch]3(c(c)(cc[ch]2(c(=cc[ch]1(c(c)(c([o-])=o)c(ccc(c)12)o))3))4))
* left-end-position:
+
* inchi-key:
** 349863
+
** uqfzktihsicspg-dshyqqbwsa-m
* centisome-position:
+
* molecular-weight:
** 74.659256   
+
** 443.688
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
+
* [[1.1.1.170-RXN]]
== Reaction(s) associated ==
+
== Reaction(s) known to produce the compound ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[1.1.1.170-RXN]]
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
+
== Reaction(s) of unknown directionality ==
** Category: [[orthology]]
+
{{#set: common-name=3&beta;-hydroxy-4&beta;-methyl-5&alpha;-cholest-7-ene-4&alpha;-carboxylate}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: inchi-key=inchikey=uqfzktihsicspg-dshyqqbwsa-m}}
* [[RXN-11750]]
+
{{#set: molecular-weight=443.688}}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12969]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13001]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13302]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13303]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13304]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13305]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-13444]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14485]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14494]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16021]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16096]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16113]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16130]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-16155]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-17110]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[PWY-5080]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7592]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5353]]
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7724]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7619]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7602]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7036]]
 
** '''14''' reactions found over '''16''' reactions in the full pathway
 
* [[PWY-7053]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7606]]
 
** '''8''' reactions found over '''14''' reactions in the full pathway
 
* [[PWY-7727]]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6433]]
 
** '''17''' reactions found over '''22''' reactions in the full pathway
 
* [[PWY-6958]]
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-7049]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7725]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6598]]
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7601]]
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7726]]
 
** '''8''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-7728]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=362793}}
 
{{#set: left-end-position=349863}}
 
{{#set: centisome-position=74.659256    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=17}}
 
{{#set: nb pathway associated=18}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-5846

  • common-name:
    • 3β-hydroxy-4β-methyl-5α-cholest-7-ene-4α-carboxylate
  • smiles:
    • cc(c)cccc(c)[ch]4(cc[ch]3(c(c)(cc[ch]2(c(=cc[ch]1(c(c)(c([o-])=o)c(ccc(c)12)o))3))4))
  • inchi-key:
    • uqfzktihsicspg-dshyqqbwsa-m
  • molecular-weight:
    • 443.688

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality