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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9680 RXN-9680] == | + | == Metabolite trans-3-cis-5-dienoyl-CoA == |
| − | * direction:
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| − | ** left-to-right
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| | * common-name: | | * common-name: |
| − | ** dimethylglycine-betaine methyltransferase | + | ** a (3e,5z)-alkan-3,5-dienoyl-coa |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/2.1.1.161 ec-2.1.1.161]
| + | * [[RXN-12519]] |
| − | * synonymous:
| + | == Reaction(s) known to produce the compound == |
| − | ** apdmt
| + | * [[RXN-12519]] |
| − | ** s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase
| + | == Reaction(s) of unknown directionality == |
| − | ** sarcosine dimethylglycine n-methyltransferase
| + | {{#set: common-name=a (3e,5z)-alkan-3,5-dienoyl-coa}} |
| − | ** glycine sarcosine dimethylglycine n-methyltransferase
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| − | ** sarcosine-dimethylglycine methyltransferase
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| − | ** sdmt
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| − | ** gsdmt
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| − | == Reaction formula == | |
| − | * 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETAINE]][c] '''+''' 1 [[PROTON]][c] | |
| − | == Gene(s) associated with this reaction == | |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * Gene: [[SJ12118]] | |
| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ10116]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12128]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12119]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ11087]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ14716]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ18177]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12116]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ03081]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ02539]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ02540]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | </div>
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| − | == Pathway(s) == | |
| − | * [[P541-PWY]], glycine betaine biosynthesis IV (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=P541-PWY P541-PWY]
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| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
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| − | * [[PWY-6004]], glycine betaine biosynthesis V (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6004 PWY-6004]
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| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | == External links ==
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10073 10073]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R07244 R07244]
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| − | {{#set: direction=left-to-right}}
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| − | {{#set: common-name=dimethylglycine-betaine methyltransferase}} | |
| − | {{#set: ec-number=ec-2.1.1.161}}
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| − | {{#set: synonymous=glycine sarcosine dimethylglycine n-methyltransferase|sarcosine dimethylglycine n-methyltransferase|sarcosine-dimethylglycine methyltransferase|gsdmt|apdmt|sdmt|s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase}}
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| − | {{#set: nb gene associated=11}}
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| − | {{#set: nb pathway associated=2}}
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| − | {{#set: reconstruction category=annotation}}
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| − | {{#set: reconstruction tool=pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=saccharina_japonica_genome}}
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