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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-DEHYDROGENASE-RXN GLUTAMATE-DEHYDROGENASE-RXN] == | + | == Metabolite 3-OXO-EICOSAPENTAENOYL-ACP == |
| − | * direction:
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| − | ** reversible
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| | * common-name: | | * common-name: |
| − | ** nad-dependent glutamate dehydrogenase | + | ** a 3-oxo-docosapentaenoyl [acp] |
| − | * ec-number:
| + | == Reaction(s) known to consume the compound == |
| − | ** [http://enzyme.expasy.org/EC/1.4.1.2 ec-1.4.1.2]
| + | * [[RXN-13008]] |
| − | == Reaction formula == | + | == Reaction(s) known to produce the compound == |
| − | * 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
| + | == Reaction(s) of unknown directionality == |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: common-name=a 3-oxo-docosapentaenoyl [acp]}} |
| − | * Gene: [[SJ00250]] | |
| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ20174]]
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ10621]]
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | == Pathway(s) == | |
| − | * [[GLUTAMATE-DEG1-PWY]], L-glutamate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-DEG1-PWY GLUTAMATE-DEG1-PWY]
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| − | ** '''1''' reactions found over '''1''' reactions in the full pathway
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| − | * [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY]
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| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
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| − | * [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
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| − | ** '''3''' reactions found over '''7''' reactions in the full pathway
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| − | * [[PWY-7126]], ethylene biosynthesis IV (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7126 PWY-7126]
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| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
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| − | * [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
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| − | ** '''11''' reactions found over '''19''' reactions in the full pathway
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| − | * [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
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| − | ** '''7''' reactions found over '''11''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | == External links ==
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| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15136 15136]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00243 R00243]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P20016 P20016]
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| − | ** [http://www.uniprot.org/uniprot/P28997 P28997]
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| − | ** [http://www.uniprot.org/uniprot/P41755 P41755]
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| − | ** [http://www.uniprot.org/uniprot/Q9JTP6 Q9JTP6]
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| − | ** [http://www.uniprot.org/uniprot/P00365 P00365]
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| − | ** [http://www.uniprot.org/uniprot/P93541 P93541]
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| − | ** [http://www.uniprot.org/uniprot/P80319 P80319]
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| − | ** [http://www.uniprot.org/uniprot/P24295 P24295]
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| − | ** [http://www.uniprot.org/uniprot/P27346 P27346]
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| − | ** [http://www.uniprot.org/uniprot/P33327 P33327]
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| − | ** [http://www.uniprot.org/uniprot/Q43260 Q43260]
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| − | ** [http://www.uniprot.org/uniprot/O04937 O04937]
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| − | ** [http://www.uniprot.org/uniprot/Q25415 Q25415]
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| − | ** [http://www.uniprot.org/uniprot/O74024 O74024]
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| − | ** [http://www.uniprot.org/uniprot/O59650 O59650]
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| − | </div>
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| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=nad-dependent glutamate dehydrogenase}} | |
| − | {{#set: ec-number=ec-1.4.1.2}}
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| − | {{#set: nb gene associated=3}}
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| − | {{#set: nb pathway associated=6}}
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| − | {{#set: reconstruction category=orthology|annotation}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
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