Difference between revisions of "2-ALPHA-HYDROXYETHYL-THPP"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] == * direction: ** left-to-right * common-...")
(Created page with "Category:metabolite == Metabolite 2-ALPHA-HYDROXYETHYL-THPP == * common-name: ** 2-(α-hydroxyethyl)thiamine diphosphate * smiles: ** cc2(=c(sc(c(c)o)=[n+](cc1(c=nc(c...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] ==
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== Metabolite 2-ALPHA-HYDROXYETHYL-THPP ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** asparagine-trna ligase
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** 2-(α-hydroxyethyl)thiamine diphosphate
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/6.1.1.22 ec-6.1.1.22]
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** cc2(=c(sc(c(c)o)=[n+](cc1(c=nc(c)=nc(n)=1))2)ccop(=o)([o-])op(=o)([o-])[o-])
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== Reaction formula ==
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* inchi-key:
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* 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PPI]][c]
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** rruvjgasjonmdy-uhfffaoysa-l
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ20233]]
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** 466.341
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PDHam2hi]]
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* Gene: [[SJ18954]]
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* [[PDHam2mi]]
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** Category: [[annotation]]
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* [[RXN-12508]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-14037]]
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** Category: [[orthology]]
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== Reaction(s) known to produce the compound ==
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN-12583]]
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== Pathway(s) ==
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* [[RXN-14037]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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== Reaction(s) of unknown directionality ==
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** '''21''' reactions found over '''21''' reactions in the full pathway
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{{#set: common-name=2-(α-hydroxyethyl)thiamine diphosphate}}
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== Reconstruction information  ==
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{{#set: inchi-key=inchikey=rruvjgasjonmdy-uhfffaoysa-l}}
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=466.341}}
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11181 11181]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P39772 P39772]
 
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** [http://www.uniprot.org/uniprot/O57980 O57980]
 
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** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
 
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** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
 
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** [http://www.uniprot.org/uniprot/P47359 P47359]
 
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** [http://www.uniprot.org/uniprot/O51128 O51128]
 
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** [http://www.uniprot.org/uniprot/O83618 O83618]
 
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** [http://www.uniprot.org/uniprot/O58008 O58008]
 
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** [http://www.uniprot.org/uniprot/O96198 O96198]
 
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** [http://www.uniprot.org/uniprot/P54262 P54262]
 
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** [http://www.uniprot.org/uniprot/P75521 P75521]
 
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** [http://www.uniprot.org/uniprot/Q48966 Q48966]
 
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** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=asparagine-trna ligase}}
 
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{{#set: ec-number=ec-6.1.1.22}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite 2-ALPHA-HYDROXYETHYL-THPP

  • common-name:
    • 2-(α-hydroxyethyl)thiamine diphosphate
  • smiles:
    • cc2(=c(sc(c(c)o)=[n+](cc1(c=nc(c)=nc(n)=1))2)ccop(=o)([o-])op(=o)([o-])[o-])
  • inchi-key:
    • rruvjgasjonmdy-uhfffaoysa-l
  • molecular-weight:
    • 466.341

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=2-ALPHA-HYDROXYETHYL-THPP&oldid=139123"