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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] == | + | == Metabolite CPD-7221 == |
| − | * direction:
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| − | ** left-to-right
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| | * common-name: | | * common-name: |
| − | ** octanoyl-coa ligase | + | ** (3z)-dodec-3-enoyl-coa |
| − | ** acyl-coa synthetase
| + | * smiles: |
| − | ** long-chain fatty acid-coa ligase
| + | ** ccccccccc=ccc(sccnc(ccnc(c(c(cop(op(occ3(c(op(=o)([o-])[o-])c(o)c(n2(c1(n=cn=c(n)c=1n=c2)))o3))(=o)[o-])(=o)[o-])(c)c)o)=o)=o)=o |
| − | * ec-number: | + | * inchi-key: |
| − | ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] | + | ** xemivmktvgrftd-qxmhvhedsa-j |
| − | == Reaction formula == | + | * molecular-weight: |
| − | * 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-195]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-196]][c] '''+''' 1 [[PPI]][c]
| + | ** 943.792 |
| − | == Gene(s) associated with this reaction == | + | == Reaction(s) known to consume the compound == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[RXN-7931]] |
| − | * Gene: [[SJ08690]]
| + | == Reaction(s) known to produce the compound == |
| − | ** Category: [[annotation]]
| + | * [[RXN-14394]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | * [[RXN-7931]] |
| − | * Gene: [[SJ08692]]
| + | == Reaction(s) of unknown directionality == |
| − | ** Category: [[annotation]]
| + | {{#set: common-name=(3z)-dodec-3-enoyl-coa}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: inchi-key=inchikey=xemivmktvgrftd-qxmhvhedsa-j}} |
| − | * Gene: [[SJ05591]]
| + | {{#set: molecular-weight=943.792}} |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ03650]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | |
| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ13972]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ08691]] | |
| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]] | |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) == | |
| − | * [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920] | |
| − | ** '''5''' reactions found over '''6''' reactions in the full pathway
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| − | * [[P221-PWY]], octane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY]
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| − | ** '''3''' reactions found over '''5''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | == External links == | |
| − | {{#set: direction=left-to-right}}
| |
| − | {{#set: common-name=octanoyl-coa ligase|long-chain fatty acid-coa ligase|acyl-coa synthetase}} | |
| − | {{#set: ec-number=ec-6.2.1.3}} | |
| − | {{#set: nb gene associated=6}} | |
| − | {{#set: nb pathway associated=2}}
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| − | {{#set: reconstruction category=orthology|annotation}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
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