Difference between revisions of "RXN-2001"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9220 RXN-9220] == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methione--menaqu...")
(Created page with "Category:reaction == Reaction RXN-2001 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1 ec-6.2.1] == Reaction formula == * 1 ATP[c]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9220 RXN-9220] ==
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== Reaction RXN-2001 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** s-adenosyl-l-methione--menaquinol methyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
+
** [http://enzyme.expasy.org/EC/6.2.1 ec-6.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-12116]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-12124]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-674]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CINNAMOYL-COA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00609]]
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* Gene: [[SJ16901]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ02693]]
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* Gene: [[SJ03066]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ11757]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ02842]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5849]], menaquinol-6 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5849 PWY-5849]
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* [[PWY-6457]], cinnamoyl-CoA biosynthesis:
** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
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* METANETX-RXN : MNXR107411
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44777 44777]
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* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02255 R02255]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=s-adenosyl-l-methione--menaquinol methyltransferase}}
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{{#set: ec-number=ec-6.2.1}}
{{#set: ec-number=ec-2.1.1.163}}
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{{#set: nb gene associated=2}}
{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-2001

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6457, cinnamoyl-CoA biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107411
  • LIGAND-RXN: