Difference between revisions of "RXN-15125"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15211 RXN-15211] == * direction: ** left-to-right * common-name: ** sphingomyelin synthase * ec...") |
(Created page with "Category:reaction == Reaction RXN-15125 == * direction: ** left-to-right * common-name: ** l-serine ammonia-lyase == Reaction formula == * 1 SER[c] '''=>''' 1 2-AMIN...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-15125 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** l-serine ammonia-lyase |
| − | |||
| − | |||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[SER]][c] '''=>''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ08066]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
| + | * Gene: [[SJ15468]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[SERDEG-PWY]], L-serine degradation: |
| − | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-3661]], glycine betaine degradation I: |
| − | ** ''' | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-5497]], purine nucleobases degradation II (anaerobic): | ||
| + | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00590 R00590] | ||
| + | * METANETX-RXN : MNXR104344 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=40664 40664] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=l-serine ammonia-lyase}} |
| − | + | {{#set: nb gene associated=2}} | |
| − | {{#set: nb gene associated= | + | {{#set: nb pathway associated=3}} |
| − | {{#set: nb pathway associated= | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Latest revision as of 11:18, 18 March 2021
Contents
Reaction RXN-15125
- direction:
- left-to-right
- common-name:
- l-serine ammonia-lyase
Reaction formula
- 1 SER[c] => 1 2-AMINOACRYLATE[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ08066
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ15468
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- SERDEG-PWY, L-serine degradation:
- 1 reactions found over 3 reactions in the full pathway
- PWY-3661, glycine betaine degradation I:
- 3 reactions found over 7 reactions in the full pathway
- PWY-5497, purine nucleobases degradation II (anaerobic):
- 10 reactions found over 24 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
