Difference between revisions of "6PFRUCTPHOS-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5471 RXN-5471] == * direction: ** left-to-right * common-name: ** dolichyl-p-glc:glc1man2glcnac...") |
(Created page with "Category:reaction == Reaction 6PFRUCTPHOS-RXN == * direction: ** left-to-right * common-name: ** 6-phosphofructokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.1...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction 6PFRUCTPHOS-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** 6-phosphofructokinase |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.7.1.11 ec-2.7.1.11] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * Gene: [[SJ02434]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ04582]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ16394]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle): |
− | ** ''' | + | ** '''7''' reactions found over '''9''' reactions in the full pathway |
+ | * [[PWY-5484]], glycolysis II (from fructose 6-phosphate): | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-1042]], glycolysis IV: | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): | ||
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR102513 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16110 16110] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00756 R00756] |
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q7M3F7 Q7M3F7] |
+ | ** [http://www.uniprot.org/uniprot/Q7M4J2 Q7M4J2] | ||
+ | ** [http://www.uniprot.org/uniprot/P12382 P12382] | ||
+ | ** [http://www.uniprot.org/uniprot/Q27665 Q27665] | ||
+ | ** [http://www.uniprot.org/uniprot/P52034 P52034] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M4K9 Q7M4K9] | ||
+ | ** [http://www.uniprot.org/uniprot/P43863 P43863] | ||
+ | ** [http://www.uniprot.org/uniprot/P20275 P20275] | ||
+ | ** [http://www.uniprot.org/uniprot/P47457 P47457] | ||
+ | ** [http://www.uniprot.org/uniprot/Q01813 Q01813] | ||
+ | ** [http://www.uniprot.org/uniprot/Q07636 Q07636] | ||
+ | ** [http://www.uniprot.org/uniprot/P16861 P16861] | ||
+ | ** [http://www.uniprot.org/uniprot/P16862 P16862] | ||
+ | ** [http://www.uniprot.org/uniprot/P00512 P00512] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A796 P0A796] | ||
+ | ** [http://www.uniprot.org/uniprot/P06999 P06999] | ||
+ | ** [http://www.uniprot.org/uniprot/P08237 P08237] | ||
+ | ** [http://www.uniprot.org/uniprot/P00511 P00511] | ||
+ | ** [http://www.uniprot.org/uniprot/P70927 P70927] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M3F5 Q7M3F5] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9TWY0 Q9TWY0] | ||
+ | ** [http://www.uniprot.org/uniprot/P30835 P30835] | ||
+ | ** [http://www.uniprot.org/uniprot/Q03215 Q03215] | ||
+ | ** [http://www.uniprot.org/uniprot/Q03216 Q03216] | ||
+ | ** [http://www.uniprot.org/uniprot/P80019 P80019] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59214 Q59214] | ||
+ | ** [http://www.uniprot.org/uniprot/Q27705 Q27705] | ||
+ | ** [http://www.uniprot.org/uniprot/P75476 P75476] | ||
+ | ** [http://www.uniprot.org/uniprot/P72830 P72830] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55988 Q55988] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49084 Q49084] | ||
+ | ** [http://www.uniprot.org/uniprot/O08333 O08333] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=6-phosphofructokinase}} |
− | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.7.1.11}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction 6PFRUCTPHOS-RXN
- direction:
- left-to-right
- common-name:
- 6-phosphofructokinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 FRUCTOSE-6P[c] => 1 ADP[c] + 1 FRUCTOSE-16-DIPHOSPHATE[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ02434
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ04582
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ16394
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle):
- 7 reactions found over 9 reactions in the full pathway
- PWY-5484, glycolysis II (from fructose 6-phosphate):
- 10 reactions found over 11 reactions in the full pathway
- PWY-1042, glycolysis IV:
- 9 reactions found over 10 reactions in the full pathway
- GLYCOLYSIS, glycolysis I (from glucose 6-phosphate):
- 11 reactions found over 12 reactions in the full pathway
- PWY-7385, 1,3-propanediol biosynthesis (engineered):
- 7 reactions found over 9 reactions in the full pathway
- ANAGLYCOLYSIS-PWY, glycolysis III (from glucose):
- 10 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links