Difference between revisions of "NARINGENIN-3-DIOXYGENASE-RXN"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10057 RXN-10057] == * direction: ** left-to-right * common-name: ** 2,5-diamino-6-(ribosylamino...") |
(Created page with "Category:reaction == Reaction NARINGENIN-3-DIOXYGENASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9] * synonymo...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction NARINGENIN-3-DIOXYGENASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
− | |||
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9] |
+ | * synonymous: | ||
+ | ** flavonone 3-hydroxylase | ||
+ | ** naringenin,2-oxoglutarate 3-dioxygenase | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NARINGENIN-CMPD]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''+''' 1 [[SUC]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** Category: [[ | + | * Gene: [[SJ14675]] |
− | *** Source: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14677]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14672]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08018]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ14670]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ07557]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[PWY1F-FLAVSYN]], flavonoid biosynthesis: |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6787]], flavonoid biosynthesis (in equisetum): |
− | ** ''' | + | ** '''6''' reactions found over '''10''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | * | + | * METANETX-RXN : MNXR107509 |
− | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02444 R02444] |
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P28038 P28038] | ||
+ | ** [http://www.uniprot.org/uniprot/Q07353 Q07353] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06942 Q06942] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05964 Q05964] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05963 Q05963] | ||
+ | ** [http://www.uniprot.org/uniprot/Q05965 Q05965] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43741 Q43741] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42927 Q42927] | ||
+ | ** [http://www.uniprot.org/uniprot/Q40344 Q40344] | ||
+ | ** [http://www.uniprot.org/uniprot/O49047 O49047] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43262 Q43262] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: | + | {{#set: ec-number=ec-1.14.11.9}} |
− | {{#set: | + | {{#set: synonymous=naringenin,2-oxoglutarate 3-dioxygenase|flavonone 3-hydroxylase}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=6}} |
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction NARINGENIN-3-DIOXYGENASE-RXN
- direction:
- left-to-right
- ec-number:
- synonymous:
- flavonone 3-hydroxylase
- naringenin,2-oxoglutarate 3-dioxygenase
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 NARINGENIN-CMPD[c] + 1 OXYGEN-MOLECULE[c] => 1 CARBON-DIOXIDE[c] + 1 DIHYDROKAEMPFEROL-CMPD[c] + 1 SUC[c]
Gene(s) associated with this reaction
- Gene: SJ14675
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14677
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14672
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ08018
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ14670
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ07557
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY1F-FLAVSYN, flavonoid biosynthesis:
- 5 reactions found over 5 reactions in the full pathway
- PWY-6787, flavonoid biosynthesis (in equisetum):
- 6 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR107509
- LIGAND-RXN:
- UNIPROT: