Difference between revisions of "SJ07491"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9894 CPD-9894] == * common-name: ** 3,4-dihydroxy-5-all-trans-octaprenylbenzoate * smiles:...")
 
(Created page with "Category:gene == Gene SJ07491 == * transcription-direction: ** positive * right-end-position: ** 242058 * left-end-position: ** 220161 * centisome-position: ** 48.37183...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9894 CPD-9894] ==
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== Gene SJ07491 ==
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* common-name:
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* transcription-direction:
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** 3,4-dihydroxy-5-all-trans-octaprenylbenzoate
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** positive
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* smiles:
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* right-end-position:
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** cc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(=c(c(=cc(c([o-])=o)=c1)o)o))c)c)c)c)c)c)c)c
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** 242058
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* inchi-key:
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* left-end-position:
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** ztgcmypriiaxfd-lhsbzcsksa-m
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** 220161
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* molecular-weight:
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* centisome-position:
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** 698.06
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** 48.37183   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-9280]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=3,4-dihydroxy-5-all-trans-octaprenylbenzoate}}
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* [[ATPASE-RXN]]
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{{#set: inchi-key=inchikey=ztgcmypriiaxfd-lhsbzcsksa-m}}
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** Category: [[annotation]]
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{{#set: molecular-weight=698.06}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[ATPSYN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-7219]]
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** '''4''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=242058}}
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{{#set: left-end-position=220161}}
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{{#set: centisome-position=48.37183    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=5}}

Latest revision as of 11:02, 18 March 2021

Gene SJ07491

  • transcription-direction:
    • positive
  • right-end-position:
    • 242058
  • left-end-position:
    • 220161
  • centisome-position:
    • 48.37183

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7219
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07491&oldid=132565"