Difference between revisions of "RXN66-480"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6002 PWY-6002] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3465 tax-34...") |
(Created page with "Category:reaction == Reaction RXN66-480 == * direction: ** left-to-right * common-name: ** phytenoyl-coa synthetase ** acyl-coa synthetase ** long-chain fatty acid-coa lig...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction RXN66-480 == |
− | + | * direction: | |
− | + | ** left-to-right | |
− | |||
− | |||
− | * | ||
− | ** | ||
* common-name: | * common-name: | ||
− | ** | + | ** phytenoyl-coa synthetase |
− | == Reaction(s) | + | ** acyl-coa synthetase |
− | * [[ | + | ** long-chain fatty acid-coa ligase |
− | == | + | * ec-number: |
− | * [ | + | ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] |
− | {{#set: | + | == Reaction formula == |
− | {{#set: | + | * 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14927]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-14928]][c] '''+''' 1 [[PPI]][c] |
− | {{#set: nb | + | == Gene(s) associated with this reaction == |
− | {{#set: | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: | + | * Gene: [[SJ08690]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ08692]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ03650]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ13972]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ08691]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ05591]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) == | ||
+ | * [[PWY66-389]], phytol degradation: | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == External links == | ||
+ | * METANETX-RXN : MNXR123750 | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=acyl-coa synthetase|phytenoyl-coa synthetase|long-chain fatty acid-coa ligase}} | ||
+ | {{#set: ec-number=ec-6.2.1.3}} | ||
+ | {{#set: nb gene associated=6}} | ||
+ | {{#set: nb pathway associated=1}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:23, 18 March 2021
Contents
Reaction RXN66-480
- direction:
- left-to-right
- common-name:
- phytenoyl-coa synthetase
- acyl-coa synthetase
- long-chain fatty acid-coa ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ08690
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ08692
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ03650
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ13972
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ08691
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ05591
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY66-389, phytol degradation:
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR123750