Difference between revisions of "SJ16746"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-36 CPD-36] == * common-name: ** 4-deoxy-β-d-gluc-4-enuronosyl-(1,3)-n-acetyl-d-galacto...")
 
(Created page with "Category:gene == Gene SJ16746 == * transcription-direction: ** positive * right-end-position: ** 276767 * left-end-position: ** 258025 * centisome-position: ** 37.831192...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-36 CPD-36] ==
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== Gene SJ16746 ==
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* common-name:
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* transcription-direction:
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** 4-deoxy-β-d-gluc-4-enuronosyl-(1,3)-n-acetyl-d-galactosamine
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** positive
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* smiles:
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* right-end-position:
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** cc(=o)nc2(c(o)oc(co)c(o)c(oc1(oc(c([o-])=o)=cc(o)c(o)1))2)
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** 276767
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* inchi-key:
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* left-end-position:
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** dlgjwsvwtwewbj-ztvljyeesa-m
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** 258025
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* molecular-weight:
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* centisome-position:
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** 378.312
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** 37.831192   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-12178]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=4-deoxy-&beta;-d-gluc-4-enuronosyl-(1,3)-n-acetyl-d-galactosamine}}
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* [[GLUTATHIONE-PEROXIDASE-RXN]]
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{{#set: inchi-key=inchikey=dlgjwsvwtwewbj-ztvljyeesa-m}}
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** Category: [[annotation]]
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{{#set: molecular-weight=378.312}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PEROXID-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14240]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15288]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17352]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8635]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[DETOX1-PWY-1]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4081]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7214]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7445]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5466]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6824]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5461]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=276767}}
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{{#set: left-end-position=258025}}
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{{#set: centisome-position=37.831192    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=8}}

Latest revision as of 11:03, 18 March 2021

Gene SJ16746

  • transcription-direction:
    • positive
  • right-end-position:
    • 276767
  • left-end-position:
    • 258025
  • centisome-position:
    • 37.831192

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • DETOX1-PWY-1
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4081
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




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