Difference between revisions of "SJ04008"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] == * common-name: ** dcmp * smiles: ** c(c2(c(cc(n1(c(n=c(c=c1)n)=o))o2)o))op([o-])(...")
(Created page with "Category:gene == Gene SJ04008 == * transcription-direction: ** negative * right-end-position: ** 465065 * left-end-position: ** 458764 * centisome-position: ** 88.47652...")
 
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] ==
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== Gene SJ04008 ==
* common-name:
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* transcription-direction:
** dcmp
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** negative
* smiles:
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* right-end-position:
** c(c2(c(cc(n1(c(n=c(c=c1)n)=o))o2)o))op([o-])([o-])=o
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** 465065
* inchi-key:
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* left-end-position:
** ncmvoabpesmrcp-shyzeuofsa-l
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** 458764
* molecular-weight:
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* centisome-position:
** 305.183
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** 88.47652   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[ATDCM]]
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* [[S.japonica_carotenoid_curated]]
* [[DCMP-DEAMINASE-RXN]]
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== Reaction(s) associated ==
* [[RXN-7913]]
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* [[GDPMANDEHYDRA-RXN]]
== Reaction(s) known to produce the compound ==
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** Category: [[annotation]]
* [[DCTP-PYROPHOSPHATASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-14187]]
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** Category: [[orthology]]
* [[RXN-14198]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
== Reaction(s) of unknown directionality ==
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: common-name=dcmp}}
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== Pathway(s) associated ==
{{#set: inchi-key=inchikey=ncmvoabpesmrcp-shyzeuofsa-l}}
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* [[PWY-66]]
{{#set: molecular-weight=305.183}}
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GDPRHAMSYN-PWY]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5738]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5739]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7573]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5740]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=465065}}
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{{#set: left-end-position=458764}}
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{{#set: centisome-position=88.47652    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=6}}

Latest revision as of 11:01, 18 March 2021

Gene SJ04008

  • transcription-direction:
    • negative
  • right-end-position:
    • 465065
  • left-end-position:
    • 458764
  • centisome-position:
    • 88.47652

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-66
    • 2 reactions found over 3 reactions in the full pathway
  • GDPRHAMSYN-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5738
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5739
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7573
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5740
    • 1 reactions found over 5 reactions in the full pathway