Difference between revisions of "SJ12870"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-6-P-GLUCONO-DELTA-LACTONE D-6-P-GLUCONO-DELTA-LACTONE] == * common-name: ** 6-phospho d-gluco...")
(Created page with "Category:gene == Gene SJ12870 == * transcription-direction: ** positive * right-end-position: ** 293758 * left-end-position: ** 273230 * centisome-position: ** 78.04074...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=D-6-P-GLUCONO-DELTA-LACTONE D-6-P-GLUCONO-DELTA-LACTONE] ==
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== Gene SJ12870 ==
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* common-name:
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* transcription-direction:
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** 6-phospho d-glucono-1,5-lactone
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** positive
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* smiles:
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* right-end-position:
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** c(op([o-])(=o)[o-])c1(c(o)c(o)c(o)c(=o)o1)
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** 293758
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* inchi-key:
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* left-end-position:
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** ijojivndfqsgab-sqougzdysa-l
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** 273230
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* molecular-weight:
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* centisome-position:
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** 256.105
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** 78.04074   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[6PGLUCONOLACT-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14819]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* [[G6PADH]]
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** Category: [[orthology]]
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* [[G6PADHh]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[G6PBDH]]
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* [[BIOTIN-CARBOXYL-RXN]]
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* [[G6PBDHh]]
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** Category: [[annotation]]
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* [[GLU6PDEHYDROG-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14819]]
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* [[DALADALALIG-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=6-phospho d-glucono-1,5-lactone}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=ijojivndfqsgab-sqougzdysa-l}}
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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{{#set: molecular-weight=256.105}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN1G-4355]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-7388]]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6679]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY0-1264]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5744]]
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** '''4''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5743]]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5789]]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-7953]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6386]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6387]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PROPIONMET-PWY]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6728]]
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** '''11''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7384]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWYG-321]]
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** '''26''' reactions found over '''205''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=293758}}
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{{#set: left-end-position=273230}}
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{{#set: centisome-position=78.04074    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=13}}

Latest revision as of 11:03, 18 March 2021

Gene SJ12870

  • transcription-direction:
    • positive
  • right-end-position:
    • 293758
  • left-end-position:
    • 273230
  • centisome-position:
    • 78.04074

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-7953
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6387
    • 2 reactions found over 8 reactions in the full pathway
  • PROPIONMET-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWYG-321
    • 26 reactions found over 205 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12870&oldid=132914"