Difference between revisions of "SJ04085"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7004 CPD-7004] == * common-name: ** dihydrogeranylgeranyl chlorophyll a * smiles: ** c=cc2(...")
 
(Created page with "Category:gene == Gene SJ04085 == * transcription-direction: ** negative * right-end-position: ** 51042 * left-end-position: ** 40970 * centisome-position: ** 36.536972...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7004 CPD-7004] ==
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== Gene SJ04085 ==
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* common-name:
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* transcription-direction:
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** dihydrogeranylgeranyl chlorophyll a
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** negative
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* smiles:
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* right-end-position:
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** c=cc2(c(c)=c4(c=c9(c(c)c(ccc(=o)occ=c(c)cccc(c)ccc=c(c)ccc=c(c)c)c5(=[n+]([mg--]36([n+]1(=c(c(cc)=c(c)c1=cc=2n34)c=c7(c(c)=c8(c(=o)[c-](c(oc)=o)c5=c(n67)8)))))9))))
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** 51042
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* inchi-key:
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* left-end-position:
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** qhucplmrabczrd-usxfxjnzsa-m
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** 40970
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* molecular-weight:
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* centisome-position:
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** 888.463
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** 36.536972   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-7665]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-7664]]
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* [[ATPASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=dihydrogeranylgeranyl chlorophyll a}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=qhucplmrabczrd-usxfxjnzsa-m}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: molecular-weight=888.463}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=51042}}
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{{#set: left-end-position=40970}}
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{{#set: centisome-position=36.536972    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:03, 18 March 2021

Gene SJ04085

  • transcription-direction:
    • negative
  • right-end-position:
    • 51042
  • left-end-position:
    • 40970
  • centisome-position:
    • 36.536972

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04085&oldid=133101"