Difference between revisions of "SJ05891"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] == * common-name: ** (3z)-phytochromobilin * smiles: *...")
 
(Created page with "Category:gene == Gene SJ05891 == * transcription-direction: ** positive * right-end-position: ** 391942 * left-end-position: ** 387332 * centisome-position: ** 79.93017...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] ==
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== Gene SJ05891 ==
* common-name:
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* transcription-direction:
** (3z)-phytochromobilin
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** positive
* smiles:
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* right-end-position:
** cc=c1(c(c)c(nc1=cc4(=c(c)c(ccc([o-])=o)=c(c=c2(c(ccc([o-])=o)=c(c)c(=n2)c=c3(c(c)=c(c=c)c(=o)n3)))n4))=o)
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** 391942
* inchi-key:
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* left-end-position:
** dkmlmzvdtgoegu-aikfxvfzsa-l
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** 387332
* molecular-weight:
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* centisome-position:
** 582.655
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** 79.93017   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
* [[1.3.7.4-RXN]]
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== Reaction(s) associated ==
== Reaction(s) of unknown directionality ==
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* [[ADENOSINE-KINASE-RXN]]
{{#set: common-name=(3z)-phytochromobilin}}
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** Category: [[annotation]]
{{#set: inchi-key=inchikey=dkmlmzvdtgoegu-aikfxvfzsa-l}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: molecular-weight=582.655}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[ADNK]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[ADNKm]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6619]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=391942}}
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{{#set: left-end-position=387332}}
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{{#set: centisome-position=79.93017    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=1}}

Latest revision as of 11:03, 18 March 2021

Gene SJ05891

  • transcription-direction:
    • positive
  • right-end-position:
    • 391942
  • left-end-position:
    • 387332
  • centisome-position:
    • 79.93017

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6619
    • 1 reactions found over 1 reactions in the full pathway