Difference between revisions of "SJ12278"

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(Created page with "Category:gene == Gene SJ03511 == * transcription-direction: ** positive * right-end-position: ** 34876 * left-end-position: ** 24015 * centisome-position: ** 20.033703...")
(Created page with "Category:gene == Gene SJ12278 == * transcription-direction: ** negative * right-end-position: ** 291786 * left-end-position: ** 288644 * centisome-position: ** 80.15039...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03511 ==
+
== Gene SJ12278 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 34876
+
** 291786
 
* left-end-position:
 
* left-end-position:
−
** 24015
+
** 288644
 
* centisome-position:
 
* centisome-position:
−
** 20.033703    
+
** 80.15039    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.2.1.84-RXN]]
+
* [[1.6.4.4-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[DISULFOXRED-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[THIOREDOXIN-REDUCT-NADPH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ALPHAGALACTOSID-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15910]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY0-1301]]
+
* [[THIOREDOX-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-842]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=291786}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=288644}}
−
{{#set: right-end-position=34876}}
+
{{#set: centisome-position=80.15039   }}
−
{{#set: left-end-position=24015}}
 
−
{{#set: centisome-position=20.033703   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ12278

  • transcription-direction:
    • negative
  • right-end-position:
    • 291786
  • left-end-position:
    • 288644
  • centisome-position:
    • 80.15039

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • THIOREDOX-PWY
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12278&oldid=133637"