Difference between revisions of "SJ02842"
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(Created page with "Category:gene == Gene SJ15629 == * transcription-direction: ** positive * right-end-position: ** 173239 * left-end-position: ** 165127 * centisome-position: ** 56.331192...") |
(Created page with "Category:gene == Gene SJ02842 == * transcription-direction: ** positive * right-end-position: ** 366689 * left-end-position: ** 359797 * centisome-position: ** 67.500206...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ02842 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 366689 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 359797 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 67.500206 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[ADOMET-DMK-METHYLTRANSFER-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-11046]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-11754]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-14177]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9191]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9205]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9220]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9227]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9235]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9242]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9361]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9362]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9363]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-9366]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN3O-54]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[PWY-6708]] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5870]] | ||
+ | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[MENAQUINONESYN-PWY]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5839]] | ||
** '''1''' reactions found over '''2''' reactions in the full pathway | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-5844]] |
− | ** '''1''' reactions found over ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
− | + | * [[PWY-5849]] | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | * [[PWY- | ||
** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5855]] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5873]] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5857]] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5872]] | ||
+ | ** '''3''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5871]] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5856]] | ||
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5890]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5891]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5892]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5895]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY3O-19]] | ||
+ | ** '''4''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7230]] | ||
+ | ** '''3''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7233]] | ||
+ | ** '''3''' reactions found over '''n.a''' reactions in the full pathway | ||
+ | </div> | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=366689}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=359797}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=67.500206 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=16}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=19}} |
Latest revision as of 11:05, 18 March 2021
Contents
Gene SJ02842
- transcription-direction:
- positive
- right-end-position:
- 366689
- left-end-position:
- 359797
- centisome-position:
- 67.500206
Organism(s) associated with this gene
Reaction(s) associated
- 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ADOMET-DMK-METHYLTRANSFER-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11046
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11754
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14177
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9191
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9205
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9220
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9227
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9235
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9242
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9361
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9362
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9363
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9366
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN3O-54
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6708
- 5 reactions found over 8 reactions in the full pathway
- PWY-5870
- 4 reactions found over 9 reactions in the full pathway
- MENAQUINONESYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-5839
- 1 reactions found over 2 reactions in the full pathway
- PWY-5844
- 1 reactions found over 1 reactions in the full pathway
- PWY-5849
- 1 reactions found over 1 reactions in the full pathway
- PWY-5855
- 3 reactions found over 8 reactions in the full pathway
- PWY-5873
- 3 reactions found over 8 reactions in the full pathway
- PWY-5857
- 3 reactions found over 8 reactions in the full pathway
- PWY-5872
- 3 reactions found over 9 reactions in the full pathway
- PWY-5871
- 3 reactions found over 8 reactions in the full pathway
- PWY-5856
- 3 reactions found over 8 reactions in the full pathway
- PWY-5890
- 1 reactions found over 2 reactions in the full pathway
- PWY-5891
- 1 reactions found over 2 reactions in the full pathway
- PWY-5892
- 1 reactions found over 2 reactions in the full pathway
- PWY-5895
- 1 reactions found over 2 reactions in the full pathway
- PWY3O-19
- 4 reactions found over 8 reactions in the full pathway
- PWY-7230
- 3 reactions found over 9 reactions in the full pathway
- PWY-7233
- 3 reactions found over n.a reactions in the full pathway