Difference between revisions of "SJ18340"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17894 CPD-17894] == * common-name: ** β-d-mannosyl-(c55 ω-saturated dolichyl pho...")
 
(Created page with "Category:gene == Gene SJ18340 == * transcription-direction: ** negative * right-end-position: ** 152919 * left-end-position: ** 132502 * centisome-position: ** 53.309357...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17894 CPD-17894] ==
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== Gene SJ18340 ==
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* common-name:
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* transcription-direction:
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** β-d-mannosyl-(c55 ω-saturated dolichyl phosphate)
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** negative
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* smiles:
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* right-end-position:
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** cc(c)cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(ccop(=o)([o-])oc1(oc(co)c(o)c(o)c(o)1))c
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** 152919
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* inchi-key:
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* left-end-position:
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** mbyvktiiznuhkn-nivaaieqsa-m
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** 132502
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* molecular-weight:
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* centisome-position:
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** 1012.461
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** 53.309357   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-16602]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[CHOLINE-KINASE-RXN]]
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{{#set: common-name=β-d-mannosyl-(c55 ω-saturated dolichyl phosphate)}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=mbyvktiiznuhkn-nivaaieqsa-m}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1012.461}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[ETHANOLAMINE-KINASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7782]]
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** '''11''' reactions found over '''16''' reactions in the full pathway
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* [[PWY3O-450]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7818]]
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** '''2''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7886]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3385]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY4FS-6]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=152919}}
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{{#set: left-end-position=132502}}
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{{#set: centisome-position=53.309357    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ18340

  • transcription-direction:
    • negative
  • right-end-position:
    • 152919
  • left-end-position:
    • 132502
  • centisome-position:
    • 53.309357

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway
  • PWY3O-450
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7818
    • 2 reactions found over 19 reactions in the full pathway
  • PWY-7886
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-3385
    • 2 reactions found over 6 reactions in the full pathway
  • PWY4FS-6
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18340&oldid=133221"