Difference between revisions of "SJ08677"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9091 CPD-9091] == * smiles: ** cc=c5(c(c)c9(n6([mg]27(n1(c(c(c)c(ccc(=o)occ=c(c)cccc(c)cccc...")
 
(Created page with "Category:gene == Gene SJ08677 == * transcription-direction: ** negative * right-end-position: ** 10657 * left-end-position: ** 4563 * centisome-position: ** 8.991133 =...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9091 CPD-9091] ==
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== Gene SJ08677 ==
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* smiles:
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* transcription-direction:
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** cc=c5(c(c)c9(n6([mg]27(n1(c(c(c)c(ccc(=o)occ=c(c)cccc(c)cccc(c)cccc(c)c)c=1c4([c-](c(oc)=o)c(=o)c3(=c(c)c(n2c3=4)=cc5=6)))=cc8(=c(c)c(c(c)=o)=c(n78)c=9))))))
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** negative
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* common-name:
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* right-end-position:
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** bacteriochlorophyll b
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** 10657
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* molecular-weight:
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* left-end-position:
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** 908.494
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** 4563
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== Reaction(s) known to consume the compound ==
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* centisome-position:
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== Reaction(s) known to produce the compound ==
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** 8.991133   
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* [[RXN-17482]]
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== Organism(s) associated with this gene  ==
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* [[RXN-17483]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) of unknown directionality ==
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== Reaction(s) associated ==
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{{#set: common-name=bacteriochlorophyll b}}
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* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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{{#set: molecular-weight=908.494}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[N-ACETYLGLUTPREDUCT-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15006]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5097]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6559]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[P101-PWY]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2942]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6562]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7153]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[HOMOSERSYN-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5154]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[GLUTORN-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7400]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=10657}}
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{{#set: left-end-position=4563}}
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{{#set: centisome-position=8.991133    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=13}}

Latest revision as of 11:04, 18 March 2021

Gene SJ08677

  • transcription-direction:
    • negative
  • right-end-position:
    • 10657
  • left-end-position:
    • 4563
  • centisome-position:
    • 8.991133

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6559
    • 2 reactions found over 4 reactions in the full pathway
  • P101-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2941
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-2942
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6562
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7153
    • 4 reactions found over 8 reactions in the full pathway
  • HOMOSERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5154
    • 8 reactions found over 9 reactions in the full pathway
  • GLUTORN-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ08677&oldid=133242"