Difference between revisions of "SJ16879"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15689 CPD-15689] == * common-name: ** (2e,5e)-dodeca-2,5-dienoyl-coa * smiles: ** ccccccc=c...")
 
(Created page with "Category:gene == Gene SJ16879 == * transcription-direction: ** positive * right-end-position: ** 215014 * left-end-position: ** 212258 * centisome-position: ** 76.98763...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15689 CPD-15689] ==
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== Gene SJ16879 ==
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* common-name:
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* transcription-direction:
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** (2e,5e)-dodeca-2,5-dienoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** ccccccc=ccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 215014
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* inchi-key:
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* left-end-position:
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** zsjrxhrcabosnc-uovvplbnsa-j
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** 212258
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* molecular-weight:
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* centisome-position:
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** 941.776
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** 76.98763   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-14801]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=(2e,5e)-dodeca-2,5-dienoyl-coa}}
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* [[GSHTRAN-RXN]]
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{{#set: inchi-key=inchikey=zsjrxhrcabosnc-uovvplbnsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=941.776}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[GST-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-13673]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-15680]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6842]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4061]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7112]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7533]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=215014}}
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{{#set: left-end-position=212258}}
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{{#set: centisome-position=76.98763    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ16879

  • transcription-direction:
    • positive
  • right-end-position:
    • 215014
  • left-end-position:
    • 212258
  • centisome-position:
    • 76.98763

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7533
    • 3 reactions found over 9 reactions in the full pathway




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