Difference between revisions of "SJ14890"

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(Created page with "Category:gene == Gene SJ10621 == * transcription-direction: ** negative * right-end-position: ** 322269 * left-end-position: ** 305442 * centisome-position: ** 78.901726...")
(Created page with "Category:gene == Gene SJ14890 == * transcription-direction: ** negative * right-end-position: ** 57545 * left-end-position: ** 34340 * centisome-position: ** 11.219545...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10621 ==
+
== Gene SJ14890 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 322269
+
** 57545
 
* left-end-position:
 
* left-end-position:
−
** 305442
+
** 34340
 
* centisome-position:
 
* centisome-position:
−
** 78.901726    
+
** 11.219545    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
* [[SERINE-O-ACETTRAN-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTDEHYD-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7870]]
−
* [[GLUTAMATE-DEG1-PWY]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[PWY-7274]]
−
* [[ALACAT2-PWY]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[CYSTSYN-PWY]]
−
* [[PWY-5022]]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-6936]]
−
* [[PWY-7126]]
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[P162-PWY]]
 
−
** '''7''' reactions found over '''11''' reactions in the full pathway
 
−
* [[GLUTSYNIII-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5675]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY490-3]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=322269}}
+
{{#set: right-end-position=57545}}
−
{{#set: left-end-position=305442}}
+
{{#set: left-end-position=34340}}
−
{{#set: centisome-position=78.901726   }}
+
{{#set: centisome-position=11.219545   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:09, 18 March 2021

Gene SJ14890

  • transcription-direction:
    • negative
  • right-end-position:
    • 57545
  • left-end-position:
    • 34340
  • centisome-position:
    • 11.219545

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7870
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7274
    • 1 reactions found over 6 reactions in the full pathway
  • CYSTSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6936
    • 5 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ14890&oldid=135892"