Difference between revisions of "CPD-15839"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] == * direction: ** left-to-right * common-name: **...")
(Created page with "Category:metabolite == Metabolite CPD-15839 == * common-name: ** δ-tocotrienol * smiles: ** cc(=cccc(=cccc(=cccc1(c)(oc2(c(cc1)=cc(=cc=2c)o)))c)c)c * inchi-key: ** o...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] ==
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== Metabolite CPD-15839 ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** succinate-semialdehyde dehydrogenase [nad(p)+]
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** δ-tocotrienol
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* ec-number:
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* smiles:
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** [http://enzyme.expasy.org/EC/1.2.1.79 ec-1.2.1.79]
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** cc(=cccc(=cccc(=cccc1(c)(oc2(c(cc1)=cc(=cc=2c)o)))c)c)c
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== Reaction formula ==
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* inchi-key:
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* 1 [[NADP]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
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** odadklylwwchnb-ldybvbfysa-n
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== Gene(s) associated with this reaction  ==
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* molecular-weight:
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* Gene: [[SJ05897]]
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** 396.612
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** Category: [[annotation]]
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== Reaction(s) known to consume the compound ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-14919]]
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== Pathway(s) ==
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== Reaction(s) known to produce the compound ==
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* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
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== Reaction(s) of unknown directionality ==
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** '''2''' reactions found over '''2''' reactions in the full pathway
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{{#set: common-name=δ-tocotrienol}}
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
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{{#set: inchi-key=inchikey=odadklylwwchnb-ldybvbfysa-n}}
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** '''10''' reactions found over '''11''' reactions in the full pathway
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{{#set: molecular-weight=396.612}}
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* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
 
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** '''1''' reactions found over '''11''' reactions in the full pathway
 
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* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
 
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** '''2''' reactions found over '''17''' reactions in the full pathway
 
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
 
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** '''2''' reactions found over '''8''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13214 13214]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
 
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** [http://www.uniprot.org/uniprot/P25526 P25526]
 
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** [http://www.uniprot.org/uniprot/O85997 O85997]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=succinate-semialdehyde dehydrogenase [nad(p)+]}}
 
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{{#set: ec-number=ec-1.2.1.79}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=5}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:15, 18 March 2021

Metabolite CPD-15839

  • common-name:
    • δ-tocotrienol
  • smiles:
    • cc(=cccc(=cccc(=cccc1(c)(oc2(c(cc1)=cc(=cc=2c)o)))c)c)c
  • inchi-key:
    • odadklylwwchnb-ldybvbfysa-n
  • molecular-weight:
    • 396.612

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-15839&oldid=138478"