Difference between revisions of "URACIL"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == * direction: ** left-to-right * common-name: ** pyruvate:[dihydrolipoyllysi...")
(Created page with "Category:metabolite == Metabolite URACIL == * common-name: ** uracil * smiles: ** c1(=cc(nc(=o)n1)=o) * inchi-key: ** isakrjdgnuqoic-uhfffaoysa-n * molecular-weight: ** 11...")
 
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[[Category:reaction]]
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[[Category:metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] ==
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== Metabolite URACIL ==
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase
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** uracil
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** pyruvate dehydrogenase (nad+)
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* smiles:
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* ec-number:
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** c1(=cc(nc(=o)n1)=o)
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** [http://enzyme.expasy.org/EC/1.2.4.1 ec-1.2.4.1]
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* inchi-key:
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== Reaction formula ==
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** isakrjdgnuqoic-uhfffaoysa-n
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* 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
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* molecular-weight:
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== Gene(s) associated with this reaction  ==
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** 112.088
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* Gene: [[SJ01042]]
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== Reaction(s) known to consume the compound ==
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** Category: [[annotation]]
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* [[RXN0-5398]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[URA-PHOSPH-RXN]]
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* Gene: [[SJ19470]]
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* [[URACIL-PRIBOSYLTRANS-RXN]]
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** Category: [[annotation]]
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* [[URPHOS-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[RXN0-2584]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN0-5398]]
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* Gene: [[SJ09312]]
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* [[URA-PHOSPH-RXN]]
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** Category: [[annotation]]
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* [[URIDINE-NUCLEOSIDASE-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[URPHOS-RXN]]
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** Category: [[orthology]]
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== Reaction(s) of unknown directionality ==
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=uracil}}
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* Gene: [[SJ00971]]
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{{#set: inchi-key=inchikey=isakrjdgnuqoic-uhfffaoysa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=112.088}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ14925]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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== Pathway(s) ==
 
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* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
 
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P06959 P06959]
 
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** [http://www.uniprot.org/uniprot/P26267 P26267]
 
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** [http://www.uniprot.org/uniprot/P35485 P35485]
 
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** [http://www.uniprot.org/uniprot/Q59097 Q59097]
 
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** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
 
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** [http://www.uniprot.org/uniprot/P45119 P45119]
 
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** [http://www.uniprot.org/uniprot/P11966 P11966]
 
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** [http://www.uniprot.org/uniprot/P35488 P35488]
 
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** [http://www.uniprot.org/uniprot/P47515 P47515]
 
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** [http://www.uniprot.org/uniprot/P21882 P21882]
 
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** [http://www.uniprot.org/uniprot/P47516 P47516]
 
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** [http://www.uniprot.org/uniprot/P21881 P21881]
 
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** [http://www.uniprot.org/uniprot/P21873 P21873]
 
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** [http://www.uniprot.org/uniprot/P16387 P16387]
 
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** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
 
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** [http://www.uniprot.org/uniprot/P08559 P08559]
 
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** [http://www.uniprot.org/uniprot/P11177 P11177]
 
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** [http://www.uniprot.org/uniprot/P29803 P29803]
 
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** [http://www.uniprot.org/uniprot/P29804 P29804]
 
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** [http://www.uniprot.org/uniprot/P26284 P26284]
 
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** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
 
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** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
 
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** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
 
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** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
 
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** [http://www.uniprot.org/uniprot/Q09171 Q09171]
 
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** [http://www.uniprot.org/uniprot/P52901 P52901]
 
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** [http://www.uniprot.org/uniprot/P79931 P79931]
 
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** [http://www.uniprot.org/uniprot/P79932 P79932]
 
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** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
 
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** [http://www.uniprot.org/uniprot/P10801 P10801]
 
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** [http://www.uniprot.org/uniprot/P21874 P21874]
 
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** [http://www.uniprot.org/uniprot/P49432 P49432]
 
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** [http://www.uniprot.org/uniprot/Q59820 Q59820]
 
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** [http://www.uniprot.org/uniprot/P35486 P35486]
 
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** [http://www.uniprot.org/uniprot/P35487 P35487]
 
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** [http://www.uniprot.org/uniprot/Q06437 Q06437]
 
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** [http://www.uniprot.org/uniprot/P32473 P32473]
 
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** [http://www.uniprot.org/uniprot/Q59107 Q59107]
 
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** [http://www.uniprot.org/uniprot/P73405 P73405]
 
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** [http://www.uniprot.org/uniprot/Q49109 Q49109]
 
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** [http://www.uniprot.org/uniprot/O48685 O48685]
 
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** [http://www.uniprot.org/uniprot/P52902 P52902]
 
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** [http://www.uniprot.org/uniprot/P52904 P52904]
 
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** [http://www.uniprot.org/uniprot/P52903 P52903]
 
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** [http://www.uniprot.org/uniprot/O66112 O66112]
 
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** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
 
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** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
 
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** [http://www.uniprot.org/uniprot/O69478 O69478]
 
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** [http://www.uniprot.org/uniprot/P10802 P10802]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=pyruvate dehydrogenase (nad+)|pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase}}
 
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{{#set: ec-number=ec-1.2.4.1}}
 
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{{#set: nb gene associated=5}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:16, 18 March 2021

Metabolite URACIL

  • common-name:
    • uracil
  • smiles:
    • c1(=cc(nc(=o)n1)=o)
  • inchi-key:
    • isakrjdgnuqoic-uhfffaoysa-n
  • molecular-weight:
    • 112.088

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=URACIL&oldid=139277"