Difference between revisions of "SJ12149"
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(Created page with "Category:gene == Gene SJ01597 == * transcription-direction: ** positive * right-end-position: ** 53513 * left-end-position: ** 47627 * centisome-position: ** 32.193893...") |
(Created page with "Category:gene == Gene SJ12149 == * transcription-direction: ** negative * right-end-position: ** 138403 * left-end-position: ** 132273 * centisome-position: ** 36.5864...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ12149 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 138403 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 132273 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 36.5864 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ERYTHRULOSE-REDUCTASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[L-XYLULOSE-REDUCTASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-17773]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-9524]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: transcription-direction= | + | * [[RXN-9528]] |
| − | {{#set: right-end-position= | + | ** Category: [[orthology]] |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RXN-9536]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7786]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-5525]] | ||
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-5515]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-5994]] | ||
| + | ** '''31''' reactions found over '''31''' reactions in the full pathway | ||
| + | * [[PWY-5971]] | ||
| + | ** '''31''' reactions found over '''31''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=138403}} | ||
| + | {{#set: left-end-position=132273}} | ||
| + | {{#set: centisome-position=36.5864 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
| + | {{#set: nb pathway associated=5}} | ||
Latest revision as of 11:05, 18 March 2021
Contents
Gene SJ12149
- transcription-direction:
- negative
- right-end-position:
- 138403
- left-end-position:
- 132273
- centisome-position:
- 36.5864
Organism(s) associated with this gene
Reaction(s) associated
- ERYTHRULOSE-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- L-XYLULOSE-REDUCTASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17773
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-9524
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RXN-9528
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RXN-9536
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-7786
- 1 reactions found over 3 reactions in the full pathway
- PWY-5525
- 2 reactions found over 5 reactions in the full pathway
- PWY-5515
- 2 reactions found over 3 reactions in the full pathway
- PWY-5994
- 31 reactions found over 31 reactions in the full pathway
- PWY-5971
- 31 reactions found over 31 reactions in the full pathway
