Difference between revisions of "S-ADENMETSYN-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-ACP-REDUCT-NADH-RXN ENOYL-ACP-REDUCT-NADH-RXN] == * direction: ** left-to-right * common-name...")
(Created page with "Category:reaction == Reaction S-ADENMETSYN-RXN == * direction: ** left-to-right * common-name: ** methionine adenosyltransferase * ec-number: ** [http://enzyme.expasy.org/...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-ACP-REDUCT-NADH-RXN ENOYL-ACP-REDUCT-NADH-RXN] ==
+
== Reaction S-ADENMETSYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2,3,4-saturated-fatty-acid-[acp] reductase
+
** methionine adenosyltransferase
−
** 2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/2.5.1.6 ec-2.5.1.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00320]]
+
* Gene: [[SJ07891]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03883]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
+
* [[ETHYL-PWY]], ethene biosynthesis I (plants):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[SAM-PWY]], S-adenosyl-L-methionine biosynthesis:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5912]], 2'-deoxymugineic acid phytosiderophore biosynthesis:
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5041]], S-adenosyl-L-methionine salvage II:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR101407
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21081 21081]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01403 R01403]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00177 R00177]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P16657 P16657]
+
** [http://www.uniprot.org/uniprot/P19358 P19358]
−
** [http://www.uniprot.org/uniprot/O24990 O24990]
+
** [http://www.uniprot.org/uniprot/P18298 P18298]
−
** [http://www.uniprot.org/uniprot/Q9JSS8 Q9JSS8]
+
** [http://www.uniprot.org/uniprot/Q91X83 Q91X83]
−
** [http://www.uniprot.org/uniprot/P0A5Y6 P0A5Y6]
+
** [http://www.uniprot.org/uniprot/Q9PNJ8 Q9PNJ8]
−
** [http://www.uniprot.org/uniprot/O84106 O84106]
+
** [http://www.uniprot.org/uniprot/P54419 P54419]
−
** [http://www.uniprot.org/uniprot/Q9PMQ7 Q9PMQ7]
+
** [http://www.uniprot.org/uniprot/P56460 P56460]
−
** [http://www.uniprot.org/uniprot/P07149 P07149]
+
** [http://www.uniprot.org/uniprot/Q9JVV6 Q9JVV6]
−
** [http://www.uniprot.org/uniprot/P0AEK4 P0AEK4]
+
** [http://www.uniprot.org/uniprot/Q9CEE0 Q9CEE0]
−
** [http://www.uniprot.org/uniprot/Q51891 Q51891]
+
** [http://www.uniprot.org/uniprot/O50163 O50163]
−
** [http://www.uniprot.org/uniprot/O04945 O04945]
+
** [http://www.uniprot.org/uniprot/P43762 P43762]
−
** [http://www.uniprot.org/uniprot/O04946 O04946]
+
** [http://www.uniprot.org/uniprot/P23686 P23686]
−
** [http://www.uniprot.org/uniprot/O24207 O24207]
+
** [http://www.uniprot.org/uniprot/P17562 P17562]
−
** [http://www.uniprot.org/uniprot/P93062 P93062]
+
** [http://www.uniprot.org/uniprot/Q7M4Y8 Q7M4Y8]
 +
** [http://www.uniprot.org/uniprot/Q9S992 Q9S992]
 +
** [http://www.uniprot.org/uniprot/Q90862 Q90862]
 +
** [http://www.uniprot.org/uniprot/P13444 P13444]
 +
** [http://www.uniprot.org/uniprot/P31153 P31153]
 +
** [http://www.uniprot.org/uniprot/Q00266 Q00266]
 +
** [http://www.uniprot.org/uniprot/P43281 P43281]
 +
** [http://www.uniprot.org/uniprot/P40320 P40320]
 +
** [http://www.uniprot.org/uniprot/P43280 P43280]
 +
** [http://www.uniprot.org/uniprot/P43282 P43282]
 +
** [http://www.uniprot.org/uniprot/P48498 P48498]
 +
** [http://www.uniprot.org/uniprot/P10659 P10659]
 +
** [http://www.uniprot.org/uniprot/Q39465 Q39465]
 +
** [http://www.uniprot.org/uniprot/P48466 P48466]
 +
** [http://www.uniprot.org/uniprot/P49612 P49612]
 +
** [http://www.uniprot.org/uniprot/P49613 P49613]
 +
** [http://www.uniprot.org/uniprot/P78003 P78003]
 +
** [http://www.uniprot.org/uniprot/Q49070 Q49070]
 +
** [http://www.uniprot.org/uniprot/P0A817 P0A817]
 +
** [http://www.uniprot.org/uniprot/P50299 P50299]
 +
** [http://www.uniprot.org/uniprot/O22350 O22350]
 +
** [http://www.uniprot.org/uniprot/P24260 P24260]
 +
** [http://www.uniprot.org/uniprot/O60198 O60198]
 +
** [http://www.uniprot.org/uniprot/Q12642 Q12642]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2,3,4-saturated-fatty-acid-[acp] reductase|2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase}}
+
{{#set: common-name=methionine adenosyltransferase}}
−
{{#set: ec-number=ec-1.3.1.9}}
+
{{#set: ec-number=ec-2.5.1.6}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction S-ADENMETSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • methionine adenosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ETHYL-PWY, ethene biosynthesis I (plants):
    • 3 reactions found over 3 reactions in the full pathway
  • METHIONINE-DEG1-PWY, L-methionine degradation I (to L-homocysteine):
    • 2 reactions found over 3 reactions in the full pathway
  • SAM-PWY, S-adenosyl-L-methionine biosynthesis:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5912, 2'-deoxymugineic acid phytosiderophore biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5041, S-adenosyl-L-methionine salvage II:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=S-ADENMETSYN-RXN&oldid=140138"