Difference between revisions of "RXN-12726"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-C-RXN PHOSPHOLIPASE-C-RXN] == * direction: ** left-to-right * common-name: ** phospho...")
(Created page with "Category:reaction == Reaction RXN-12726 == * direction: ** left-to-right * common-name: ** selenocysteine synthase ** cysteine synthase * ec-number: ** [http://enzyme.expa...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-C-RXN PHOSPHOLIPASE-C-RXN] ==
+
== Reaction RXN-12726 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phospholipase c
+
** selenocysteine synthase
 +
** cysteine synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.4.3 ec-3.1.4.3]
+
** [http://enzyme.expasy.org/EC/2.5.1.47 ec-2.5.1.47]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHATIDYLCHOLINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ACETYLSERINE]][c] '''+''' 1 [[CPD-678]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20221]]
+
* Gene: [[SJ16706]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16244]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ01657]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16245]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15937]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
+
* [[PWY-6936]], seleno-amino acid biosynthesis (plants):
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10605 10605]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01312 R01312]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03601 R03601]
−
* UNIPROT:
+
* METANETX-RXN : MNXR95414
−
** [http://www.uniprot.org/uniprot/P06200 P06200]
 
−
** [http://www.uniprot.org/uniprot/P15310 P15310]
 
−
** [http://www.uniprot.org/uniprot/P13217 P13217]
 
−
** [http://www.uniprot.org/uniprot/Q7M440 Q7M440]
 
−
** [http://www.uniprot.org/uniprot/P15713 P15713]
 
−
** [http://www.uniprot.org/uniprot/P34024 P34024]
 
−
** [http://www.uniprot.org/uniprot/Q92137 Q92137]
 
−
** [http://www.uniprot.org/uniprot/P20419 P20419]
 
−
** [http://www.uniprot.org/uniprot/Q07722 Q07722]
 
−
** [http://www.uniprot.org/uniprot/P25455 P25455]
 
−
** [http://www.uniprot.org/uniprot/Q62084 Q62084]
 
−
** [http://www.uniprot.org/uniprot/P33376 P33376]
 
−
** [http://www.uniprot.org/uniprot/P09598 P09598]
 
−
** [http://www.uniprot.org/uniprot/P16885 P16885]
 
−
** [http://www.uniprot.org/uniprot/P09194 P09194]
 
−
** [http://www.uniprot.org/uniprot/P33378 P33378]
 
−
** [http://www.uniprot.org/uniprot/Q48789 Q48789]
 
−
** [http://www.uniprot.org/uniprot/Q01970 Q01970]
 
−
** [http://www.uniprot.org/uniprot/Q9Z1B3 Q9Z1B3]
 
−
** [http://www.uniprot.org/uniprot/Q62076 Q62076]
 
−
** [http://www.uniprot.org/uniprot/Q48580 Q48580]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phospholipase c}}
+
{{#set: common-name=cysteine synthase|selenocysteine synthase}}
−
{{#set: ec-number=ec-3.1.4.3}}
+
{{#set: ec-number=ec-2.5.1.47}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-12726

  • direction:
    • left-to-right
  • common-name:
    • selenocysteine synthase
    • cysteine synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6936, seleno-amino acid biosynthesis (plants):
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR95414





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