Difference between revisions of "RXN0-5330"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GALACTCAT-PWY GALACTCAT-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2...") |
(Created page with "Category:reaction == Reaction RXN0-5330 == * direction: ** left-to-right * common-name: ** nadh:ubiquinone oxidoreductase ** nadh dehydrogenase (ubiquinone) * ec-number: *...") |
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− | [[Category: | + | [[Category:reaction]] |
− | == | + | == Reaction RXN0-5330 == |
− | * | + | * direction: |
− | ** | + | ** left-to-right |
− | |||
* common-name: | * common-name: | ||
− | ** | + | ** nadh:ubiquinone oxidoreductase |
− | == Reaction(s) | + | ** nadh dehydrogenase (ubiquinone) |
− | * [[ | + | * ec-number: |
− | == | + | ** [http://enzyme.expasy.org/EC/1.6.5.9 ec-1.6.5.9] |
− | * [ | + | == Reaction formula == |
− | * [http:// | + | * 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Ubiquinols]][c] |
− | {{#set: | + | == Gene(s) associated with this reaction == |
− | {{#set: common-name= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: nb | + | * Gene: [[SJ19412]] |
− | {{#set: | + | ** Category: [[annotation]] |
− | {{#set: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
+ | * Gene: [[SJ15450]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ15310]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ10422]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ02471]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ03600]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ21333]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ14995]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ05715]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ09960]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ16410]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ21017]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ22333]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21895]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
+ | == Pathway(s) == | ||
+ | * [[PWY0-1573]], nitrate reduction VIIIb (dissimilatory): | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7269]], mitochondrial NADPH production (yeast): | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1568]], NADH to cytochrome bd oxidase electron transfer II: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY0-1567]], NADH to cytochrome bo oxidase electron transfer II: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == External links == | ||
+ | * METANETX-RXN : MNXR123249 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23153 23153] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=nadh:ubiquinone oxidoreductase|nadh dehydrogenase (ubiquinone)}} | ||
+ | {{#set: ec-number=ec-1.6.5.9}} | ||
+ | {{#set: nb gene associated=14}} | ||
+ | {{#set: nb pathway associated=5}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:25, 18 March 2021
Contents
Reaction RXN0-5330
- direction:
- left-to-right
- common-name:
- nadh:ubiquinone oxidoreductase
- nadh dehydrogenase (ubiquinone)
- ec-number:
Reaction formula
- 1 NADH[c] + 1 PROTON[c] + 1 Ubiquinones[c] => 1 NAD[c] + 1 Ubiquinols[c]
Gene(s) associated with this reaction
- Gene: SJ19412
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ15450
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ15310
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ10422
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ02471
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ03600
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ21333
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14995
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ05715
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ09960
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ16410
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ21017
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ22333
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ21895
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-1573, nitrate reduction VIIIb (dissimilatory):
- 1 reactions found over 2 reactions in the full pathway
- PWY-7269, mitochondrial NADPH production (yeast):
- 5 reactions found over 5 reactions in the full pathway
- PWY0-1568, NADH to cytochrome bd oxidase electron transfer II:
- 1 reactions found over 2 reactions in the full pathway
- PWY0-1567, NADH to cytochrome bo oxidase electron transfer II:
- 1 reactions found over 2 reactions in the full pathway
- PWY-7279, aerobic respiration II (cytochrome c) (yeast):
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR123249
- RHEA: