Difference between revisions of "SJ04008"

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(Created page with "Category:gene == Gene SJ13030 == * transcription-direction: ** positive * right-end-position: ** 343278 * left-end-position: ** 332262 * centisome-position: ** 95.737564...")
(Created page with "Category:gene == Gene SJ04008 == * transcription-direction: ** negative * right-end-position: ** 465065 * left-end-position: ** 458764 * centisome-position: ** 88.47652...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13030 ==
+
== Gene SJ04008 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 343278
+
** 465065
 
* left-end-position:
 
* left-end-position:
−
** 332262
+
** 458764
 
* centisome-position:
 
* centisome-position:
−
** 95.737564    
+
** 88.47652    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[GDPMANDEHYDRA-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-11135]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
* [[PWY-66]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[GDPRHAMSYN-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-5738]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5739]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7573]]
−
{{#set: right-end-position=343278}}
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=332262}}
+
* [[PWY-5740]]
−
{{#set: centisome-position=95.737564   }}
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: transcription-direction=negative}}
−
{{#set: nb reaction associated=6}}
+
{{#set: right-end-position=465065}}
−
{{#set: nb pathway associated=4}}
+
{{#set: left-end-position=458764}}
 +
{{#set: centisome-position=88.47652   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=1}}
 +
{{#set: nb pathway associated=6}}

Latest revision as of 11:01, 18 March 2021

Gene SJ04008

  • transcription-direction:
    • negative
  • right-end-position:
    • 465065
  • left-end-position:
    • 458764
  • centisome-position:
    • 88.47652

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-66
    • 2 reactions found over 3 reactions in the full pathway
  • GDPRHAMSYN-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5738
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5739
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7573
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5740
    • 1 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ04008&oldid=131907"