Difference between revisions of "SJ19166"
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(Created page with "Category:gene == Gene SJ08624 == * transcription-direction: ** positive * right-end-position: ** 293242 * left-end-position: ** 278413 * centisome-position: ** 63.916294...") |
(Created page with "Category:gene == Gene SJ19166 == * transcription-direction: ** negative * right-end-position: ** 524377 * left-end-position: ** 497049 * centisome-position: ** 77.68660...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ19166 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 524377 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 497049 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 77.68660 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[ATPASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
− | *** source: [[ | + | * [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12195]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-12196]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN0-5462]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-7539]] |
− | ** '''4''' reactions found over ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | * [[PWY-6797]] |
− | {{#set: right-end-position= | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
− | {{#set: left-end-position= | + | * [[PWY-6147]] |
− | {{#set: centisome-position= | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
− | {{#set: organism associated=S. | + | * [[PWY-6545]] |
− | {{#set: nb reaction associated= | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
− | {{#set: nb pathway associated= | + | * [[PWY-7210]] |
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7198]] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7184]] | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=524377}} | ||
+ | {{#set: left-end-position=497049}} | ||
+ | {{#set: centisome-position=77.68660 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=7}} | ||
+ | {{#set: nb pathway associated=7}} |
Latest revision as of 11:02, 18 March 2021
Contents
Gene SJ19166
- transcription-direction:
- negative
- right-end-position:
- 524377
- left-end-position:
- 497049
- centisome-position:
- 77.68660
Organism(s) associated with this gene
Reaction(s) associated
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-6797
- 3 reactions found over 7 reactions in the full pathway
- PWY-6147
- 5 reactions found over 5 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway