Difference between revisions of "SJ10100"

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(Created page with "Category:gene == Gene SJ14668 == * transcription-direction: ** negative * right-end-position: ** 142204 * left-end-position: ** 120668 * centisome-position: ** 38.84509...")
(Created page with "Category:gene == Gene SJ10100 == * transcription-direction: ** positive * right-end-position: ** 371133 * left-end-position: ** 348566 * centisome-position: ** 87.54179...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14668 ==
+
== Gene SJ10100 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 142204
+
** 371133
 
* left-end-position:
 
* left-end-position:
−
** 120668
+
** 348566
 
* centisome-position:
 
* centisome-position:
−
** 38.84509    
+
** 87.54179    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEPCARBOXYKIN-RXN]]
+
* [[GBDP]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GDPPYPHOSKIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GTPPYPHOSKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* [[PPGPPSYN-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-6427]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7117]]
+
* [[PPGPPMET-PWY]]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-561]]
+
{{#set: transcription-direction=positive}}
−
** '''6''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=371133}}
−
* [[GLUCONEO-PWY]]
+
{{#set: left-end-position=348566}}
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=87.54179   }}
−
{{#set: transcription-direction=negative}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: right-end-position=142204}}
+
{{#set: nb reaction associated=5}}
−
{{#set: left-end-position=120668}}
+
{{#set: nb pathway associated=1}}
−
{{#set: centisome-position=38.84509   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=1}}
 
−
{{#set: nb pathway associated=3}}
 

Latest revision as of 11:09, 18 March 2021

Gene SJ10100

  • transcription-direction:
    • positive
  • right-end-position:
    • 371133
  • left-end-position:
    • 348566
  • centisome-position:
    • 87.54179

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PPGPPMET-PWY
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10100&oldid=135784"