Difference between revisions of "SJ06109"

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(Created page with "Category:gene == Gene SJ12275 == * transcription-direction: ** positive * right-end-position: ** 271751 * left-end-position: ** 267195 * centisome-position: ** 74.19446...")
(Created page with "Category:gene == Gene SJ06109 == * transcription-direction: ** negative * right-end-position: ** 293214 * left-end-position: ** 290043 * centisome-position: ** 60.267673...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12275 ==
+
== Gene SJ06109 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 271751
+
** 293214
 
* left-end-position:
 
* left-end-position:
−
** 267195
+
** 290043
 
* centisome-position:
 
* centisome-position:
−
** 74.19446    
+
** 60.267673    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.2.2.23-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4.2.99.18-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-2601]]
+
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[RXN-12196]]
−
{{#set: right-end-position=271751}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=267195}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=74.19446   }}
+
* [[RXN0-5462]]
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
** Category: [[annotation]]
−
{{#set: nb reaction associated=3}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=293214}}
 +
{{#set: left-end-position=290043}}
 +
{{#set: centisome-position=60.267673   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:09, 18 March 2021

Gene SJ06109

  • transcription-direction:
    • negative
  • right-end-position:
    • 293214
  • left-end-position:
    • 290043
  • centisome-position:
    • 60.267673

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ06109&oldid=136049"