Difference between revisions of "RXN-15125"

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(Created page with "Category:reaction == Reaction ALCOHOL-DEHYDROGENASE-NADP+-RXN == * direction: ** reversible * common-name: ** alcohol dehydrogenase (nadp+) * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction RXN-15125 == * direction: ** left-to-right * common-name: ** l-serine ammonia-lyase == Reaction formula == * 1 SER[c] '''=>''' 1 2-AMIN...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALCOHOL-DEHYDROGENASE-NADP+-RXN ==
+
== Reaction RXN-15125 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** alcohol dehydrogenase (nadp+)
+
** l-serine ammonia-lyase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.71 ec-1.1.1.71]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Alcohols]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''<=>''' 1 [[Aldehydes]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[SER]][c] '''=>''' 1 [[2-AMINOACRYLATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ08066]]
−
* Gene: [[SJ19151]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ10501]]
+
* Gene: [[SJ15468]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ13034]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06456]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ05644]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12574]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07103]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06470]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[SERDEG-PWY]], L-serine degradation:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3661]], glycine betaine degradation I:
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* LIGAND-RXN:
−
{{#set: common-name=alcohol dehydrogenase (nadp+)}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00590 R00590]
−
{{#set: ec-number=ec-1.1.1.71}}
+
* METANETX-RXN : MNXR104344
−
{{#set: nb gene associated=8}}
+
* RHEA:
−
{{#set: nb pathway associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=40664 40664]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=l-serine ammonia-lyase}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-15125

  • direction:
    • left-to-right
  • common-name:
    • l-serine ammonia-lyase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SERDEG-PWY, L-serine degradation:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3661, glycine betaine degradation I:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic):
    • 10 reactions found over 24 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR104344
  • RHEA:





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