Difference between revisions of "IMIDPHOSDEHYD-RXN"
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(Created page with "Category:reaction == Reaction RXN-11354 == * direction: ** reversible * common-name: ** 15-cis-ζ-carotene isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.2.1...") |
(Created page with "Category:reaction == Reaction IMIDPHOSDEHYD-RXN == * direction: ** left-to-right * common-name: ** imidazoleglycerol-phosphate dehydratase * ec-number: ** [http://enzyme.e...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction IMIDPHOSDEHYD-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** imidazoleglycerol-phosphate dehydratase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.2.1.19 ec-4.2.1.19] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''=>''' 1 [[IMIDAZOLE-ACETOL-P]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ17441]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[HISTSYN-PWY]], L-histidine biosynthesis: |
− | ** ''' | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR100813 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11041 11041] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03457 R03457] |
− | * | + | * UNIPROT: |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q58109 Q58109] |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/P06633 P06633] |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P10368 P10368] |
− | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/P06987 P06987] |
+ | ** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76] | ||
+ | ** [http://www.uniprot.org/uniprot/P44327 P44327] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02134 Q02134] | ||
+ | ** [http://www.uniprot.org/uniprot/P64371 P64371] | ||
+ | ** [http://www.uniprot.org/uniprot/Q12578 Q12578] | ||
+ | ** [http://www.uniprot.org/uniprot/P18787 P18787] | ||
+ | ** [http://www.uniprot.org/uniprot/P16247 P16247] | ||
+ | ** [http://www.uniprot.org/uniprot/P28624 P28624] | ||
+ | ** [http://www.uniprot.org/uniprot/P34041 P34041] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02986 Q02986] | ||
+ | ** [http://www.uniprot.org/uniprot/P40374 P40374] | ||
+ | ** [http://www.uniprot.org/uniprot/P48054 P48054] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43072 Q43072] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X7B9 Q9X7B9] | ||
+ | ** [http://www.uniprot.org/uniprot/O48932 O48932] | ||
+ | </div> | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=imidazoleglycerol-phosphate dehydratase}} | ||
+ | {{#set: ec-number=ec-4.2.1.19}} | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}} |
Latest revision as of 11:19, 18 March 2021
Contents
Reaction IMIDPHOSDEHYD-RXN
- direction:
- left-to-right
- common-name:
- imidazoleglycerol-phosphate dehydratase
- ec-number:
Reaction formula
- 1 D-ERYTHRO-IMIDAZOLE-GLYCEROL-P[c] => 1 IMIDAZOLE-ACETOL-P[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ17441
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- HISTSYN-PWY, L-histidine biosynthesis:
- 10 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links