Difference between revisions of "GDPPYPHOSKIN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-8460 == * direction: ** left-to-right * common-name: ** dopa dioxygenase * ec-number: ** [http://enzyme.expasy.org/EC/1.13.11.29 ec-1.13....")
(Created page with "Category:reaction == Reaction GDPPYPHOSKIN-RXN == * direction: ** left-to-right * common-name: ** gdp pyrophosphokinase ** gtp diphosphokinase * ec-number: ** [http://enzy...")
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8460 ==
+
== Reaction GDPPYPHOSKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dopa dioxygenase
+
** gdp pyrophosphokinase
 +
** gtp diphosphokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.13.11.29 ec-1.13.11.29]
+
** [http://enzyme.expasy.org/EC/2.7.6.5 ec-2.7.6.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-253]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GUANOSINE-5DP-3DP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01081]]
+
* Gene: [[SJ13961]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ10100]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07200]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ14690]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5394]], betalamic acid biosynthesis:
+
* [[PPGPPMET-PWY]], ppGpp metabolism:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100088
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21221 21221]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28099 28099]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08836 R08836]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dopa dioxygenase}}
+
{{#set: common-name=gdp pyrophosphokinase|gtp diphosphokinase}}
−
{{#set: ec-number=ec-1.13.11.29}}
+
{{#set: ec-number=ec-2.7.6.5}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}

Latest revision as of 11:20, 18 March 2021

Reaction GDPPYPHOSKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • gdp pyrophosphokinase
    • gtp diphosphokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PPGPPMET-PWY, ppGpp metabolism:
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR100088
  • RHEA:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GDPPYPHOSKIN-RXN&oldid=141175"