Difference between revisions of "CYSTEINE-DIOXYGENASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-308 == * direction: ** left-to-right * common-name: ** l-cysteine:[protein cysteine] sulfurtransferase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction CYSTEINE-DIOXYGENASE-RXN == * direction: ** left-to-right * common-name: ** cysteine dioxygenase * ec-number: ** [http://enzyme.expasy.org/EC...")
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-308 ==
+
== Reaction CYSTEINE-DIOXYGENASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-cysteine:[protein cysteine] sulfurtransferase
+
** cysteine dioxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
+
** [http://enzyme.expasy.org/EC/1.13.11.20 ec-1.13.11.20]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[3-SULFINOALANINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ14758]]
−
* Gene: [[SJ17324]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ03223]]
+
* Gene: [[SJ16671]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ13485]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04060]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09474]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19133]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria):
+
* [[CYSTEINE-DEG-PWY]], L-cysteine degradation I:
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria):
+
* [[PWY-5331]], taurine biosynthesis I:
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY0-1021]], L-alanine biosynthesis III:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6823]], molybdenum cofactor biosynthesis:
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7904]], tRNA-uridine 2-thiolation (thermophilic bacteria):
 
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7892]], tRNA-uridine 2-thiolation and selenation (bacteria):
 
−
** '''3''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7891]], tRNA-uridine 2-thiolation (yeast mitochondria):
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic):
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96993
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17458 17458]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20442 20442]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00893 R00893]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P21816 P21816]
 +
** [http://www.uniprot.org/uniprot/Q16878 Q16878]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-cysteine:[protein cysteine] sulfurtransferase}}
+
{{#set: common-name=cysteine dioxygenase}}
−
{{#set: ec-number=ec-2.8.1.7}}
+
{{#set: ec-number=ec-1.13.11.20}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction CYSTEINE-DIOXYGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • cysteine dioxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CYSTEINE-DEG-PWY, L-cysteine degradation I:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5331, taurine biosynthesis I:
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CYSTEINE-DIOXYGENASE-RXN&oldid=141270"