Difference between revisions of "RXN-9538"

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(Created page with "Category:reaction == Reaction TAGAKIN-RXN == * direction: ** left-to-right * common-name: ** tagatose-6-phosphate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1...")
(Created page with "Category:reaction == Reaction RXN-9538 == * direction: ** left-to-right * common-name: ** trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific) ** fa...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TAGAKIN-RXN ==
+
== Reaction RXN-9538 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** tagatose-6-phosphate kinase
+
** trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)
 +
** fatty acid synthase
 +
** myristoyl-[acp] reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.144 ec-2.7.1.144]
+
** [http://enzyme.expasy.org/EC/1.3.1.10 ec-1.3.1.10]
 +
** [http://enzyme.expasy.org/EC/1.3.1.39 ec-1.3.1.39]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
* synonymous:
 +
** trans tetradec-2-enoyl-[acp] reductase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[TAGATOSE-6-PHOSPHATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TAGATOSE-1-6-DIPHOSPHATE]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Tetradec-2-enoyl-ACPs]][c] '''=>''' 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03418]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04769]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00320]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00613]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06944]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11672]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03883]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GALACTITOLCAT-PWY]], galactitol degradation:
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-7395]], D-galactosamine and N-acetyl-D-galactosamine degradation:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7077]], N-acetyl-D-galactosamine degradation:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[LACTOSECAT-PWY]], lactose and galactose degradation I:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12421 12421]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03236 R03236]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04967 R04967]
 +
* METANETX-RXN : MNXR109256
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=tagatose-6-phosphate kinase}}
+
{{#set: common-name=fatty acid synthase|myristoyl-[acp] reductase|trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)}}
−
{{#set: ec-number=ec-2.7.1.144}}
+
{{#set: ec-number=ec-2.3.1.85|ec-1.3.1.10|ec-1.3.1.39|ec-2.3.1.86}}
−
{{#set: nb gene associated=1}}
+
{{#set: synonymous=trans tetradec-2-enoyl-[acp] reductase}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb gene associated=15}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-9538

  • direction:
    • left-to-right
  • common-name:
    • trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)
    • fatty acid synthase
    • myristoyl-[acp] reductase
  • ec-number:
  • synonymous:
    • trans tetradec-2-enoyl-[acp] reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • LIGAND-RXN:
  • METANETX-RXN : MNXR109256
  • Property "Common-name" (as page type) with input value "myristoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Property "Synonymous" (as page type) with input value "trans tetradec-2-enoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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