Difference between revisions of "SJ07466"
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(Created page with "Category:gene == Gene SJ07300 == * transcription-direction: ** negative * right-end-position: ** 182044 * left-end-position: ** 157501 * centisome-position: ** 33.941696...") |
(Created page with "Category:gene == Gene SJ07466 == * transcription-direction: ** negative * right-end-position: ** 447555 * left-end-position: ** 443235 * centisome-position: ** 97.33535...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ07466 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 447555 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 443235 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 97.33535 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[ADENOSYLHOMOCYSTEINASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[CYSTEINE-AMINOTRANSFERASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[PHEAMINOTRANS-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[TYROSINE-AMINOTRANSFERASE-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY0- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[METHIONINE-DEG1-PWY]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5041]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6153]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6154]] | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6151]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-I9]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1534]] | ||
+ | ** '''1''' reactions found over '''n.a''' reactions in the full pathway | ||
+ | * [[PWY-5329]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7432]] | ||
+ | ** '''3''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5079]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[ANAPHENOXI-PWY]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PHESYN]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7518]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-3581]] | ||
+ | ** '''6''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY3O-4108]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5048]] | ||
+ | ** '''1''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[TYRFUMCAT-PWY]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7514]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5886]] | ||
** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[TYRSYN]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5754]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5151]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | </div> | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=447555}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=443235}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=97.33535 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=22}} |
Latest revision as of 11:09, 18 March 2021
Contents
Gene SJ07466
- transcription-direction:
- negative
- right-end-position:
- 447555
- left-end-position:
- 443235
- centisome-position:
- 97.33535
Organism(s) associated with this gene
Reaction(s) associated
- ADENOSYLHOMOCYSTEINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- CYSTEINE-AMINOTRANSFERASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- PHEAMINOTRANS-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- TYROSINE-AMINOTRANSFERASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- METHIONINE-DEG1-PWY
- 2 reactions found over 3 reactions in the full pathway
- PWY-5041
- 3 reactions found over 3 reactions in the full pathway
- PWY-6153
- 1 reactions found over 5 reactions in the full pathway
- PWY-6154
- 1 reactions found over 6 reactions in the full pathway
- PWY-6151
- 3 reactions found over 4 reactions in the full pathway
- PWY-I9
- 4 reactions found over 5 reactions in the full pathway
- PWY0-1534
- 1 reactions found over n.a reactions in the full pathway
- PWY-5329
- 2 reactions found over 2 reactions in the full pathway
- PWY-7432
- 3 reactions found over 2 reactions in the full pathway
- PWY-5079
- 2 reactions found over 4 reactions in the full pathway
- ANAPHENOXI-PWY
- 1 reactions found over 3 reactions in the full pathway
- PHESYN
- 3 reactions found over 3 reactions in the full pathway
- PWY-7518
- 1 reactions found over 2 reactions in the full pathway
- PWY-3581
- 6 reactions found over 11 reactions in the full pathway
- PWY3O-4108
- 2 reactions found over 4 reactions in the full pathway
- PWY-5048
- 1 reactions found over 10 reactions in the full pathway
- TYRFUMCAT-PWY
- 2 reactions found over 5 reactions in the full pathway
- PWY-7514
- 1 reactions found over 3 reactions in the full pathway
- PWY-5886
- 1 reactions found over 1 reactions in the full pathway
- TYRSYN
- 3 reactions found over 3 reactions in the full pathway
- PWY-5754
- 2 reactions found over 5 reactions in the full pathway
- PWY-5151
- 1 reactions found over 2 reactions in the full pathway