Difference between revisions of "SJ21090"

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(Created page with "Category:gene == Gene SJ06969 == * transcription-direction: ** positive * right-end-position: ** 179426 * left-end-position: ** 171123 * centisome-position: ** 36.6798...")
(Created page with "Category:gene == Gene SJ21090 == * transcription-direction: ** negative * right-end-position: ** 77638 * left-end-position: ** 69498 * centisome-position: ** 35.05008...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06969 ==
+
== Gene SJ21090 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 179426
+
** 77638
 
* left-end-position:
 
* left-end-position:
−
** 171123
+
** 69498
 
* centisome-position:
 
* centisome-position:
−
** 36.6798    
+
** 35.05008    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]]
+
* [[3.1.3.74-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12560]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12968]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[INORGPYROPHOSPHAT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12994]]
+
* [[RXN-14046]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13279]]
+
* [[RXN-14181]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13298]]
+
* [[RXN-5647]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13299]]
+
* [[RXN-7948]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13300]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13301]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13443]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14484]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14493]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16020]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16095]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16112]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16129]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-16154]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17109]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-5901]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7698]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7204]]
−
* [[PWY66-380]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7805]]
−
* [[PWY-7948]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7807]]
−
* [[PWY-7592]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-3385]]
−
* [[PWY-5353]]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7602]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7724]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7619]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7036]]
 
−
** '''14''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-7727]]
 
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7053]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=77638}}
−
* [[PWY-7606]]
+
{{#set: left-end-position=69498}}
−
** '''8''' reactions found over '''14''' reactions in the full pathway
+
{{#set: centisome-position=35.05008   }}
−
* [[PWY-6433]]
 
−
** '''17''' reactions found over '''22''' reactions in the full pathway
 
−
* [[PWY-7049]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6958]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6598]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7601]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7725]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7728]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7726]]
 
−
** '''8''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5676]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY1-3]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7216]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5741]]
 
−
** '''2''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5080]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=179426}}
 
−
{{#set: left-end-position=171123}}
 
−
{{#set: centisome-position=36.6798   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=20}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=24}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:08, 18 March 2021

Gene SJ21090

  • transcription-direction:
    • negative
  • right-end-position:
    • 77638
  • left-end-position:
    • 69498
  • centisome-position:
    • 35.05008

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7204
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-3385
    • 2 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ21090&oldid=135421"